Machine learning SNP based prediction for precision medicine

DSW Ho, W Schierding, M Wake, R Saffery… - Frontiers in …, 2019 - frontiersin.org
In the past decade, precision genomics based medicine has emerged to provide tailored
and effective healthcare for patients depending upon their genetic features. Genome Wide …

Application of artificial intelligence and machine learning for COVID-19 drug discovery and vaccine design

H Lv, L Shi, JW Berkenpas, FY Dao… - Briefings in …, 2021 - academic.oup.com
The global pandemic of coronavirus disease 2019 (COVID-19), caused by severe acute
respiratory syndrome coronavirus 2, has led to a dramatic loss of human life worldwide …

Pse-in-One: a web server for generating various modes of pseudo components of DNA, RNA, and protein sequences

B Liu, F Liu, X Wang, J Chen, L Fang… - Nucleic acids …, 2015 - academic.oup.com
With the avalanche of biological sequences generated in the post-genomic age, one of the
most challenging problems in computational biology is how to effectively formulate the …

A first computational frame for recognizing heparin-binding protein

W Zhu, SS Yuan, J Li, CB Huang, H Lin, B Liao - Diagnostics, 2023 - mdpi.com
Heparin-binding protein (HBP) is a cationic antibacterial protein derived from multinuclear
neutrophils and an important biomarker of infectious diseases. The correct identification of …

BioSeq-Analysis: a platform for DNA, RNA and protein sequence analysis based on machine learning approaches

B Liu - Briefings in bioinformatics, 2019 - academic.oup.com
With the avalanche of biological sequences generated in the post-genomic age, one of the
most challenging problems is how to computationally analyze their structures and functions …

A novel features ranking metric with application to scalable visual and bioinformatics data classification

Q Zou, J Zeng, L Cao, R Ji - Neurocomputing, 2016 - Elsevier
Coming with the big data era, the filtering of uninformative data becomes emerging. To this
end, ranking the high dimensionality features plays an important role. However, most of the …

Inferring microRNA-disease associations by random walk on a heterogeneous network with multiple data sources

Y Liu, X Zeng, Z He, Q Zou - IEEE/ACM transactions on …, 2016 - ieeexplore.ieee.org
Since the discovery of the regulatory function of microRNA (miRNA), increased attention has
focused on identifying the relationship between miRNA and disease. It has been suggested …

Prediction of human protein subcellular localization using deep learning

L Wei, Y Ding, R Su, J Tang, Q Zou - Journal of Parallel and Distributed …, 2018 - Elsevier
Protein subcellular localization (PSL), as one of the most critical characteristics of human
cells, plays an important role for understanding specific functions and biological processes …

Improved prediction of protein–protein interactions using novel negative samples, features, and an ensemble classifier

L Wei, P **ng, J Zeng, JX Chen, R Su, F Guo - Artificial Intelligence in …, 2017 - Elsevier
Computational methods are employed in bioinformatics to predict protein–protein
interactions (PPIs). PPIs and protein–protein non-interactions (PPNIs) display different levels …

Finding the best classification threshold in imbalanced classification

Q Zou, S **e, Z Lin, M Wu, Y Ju - Big Data Research, 2016 - Elsevier
Classification with imbalanced class distributions is a major problem in machine learning.
Researchers have given considerable attention to the applications in many real-world …