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Adaptive template transformer for mitochondria segmentation in electron microscopy images
Mitochondria, as tiny structures within the cell, are of significant importance to study cell
functions for biological and clinical analysis. And exploring how to automatically segment …
functions for biological and clinical analysis. And exploring how to automatically segment …
Biomedical Image Segmentation: A Systematic Literature Review of Deep Learning Based Object Detection Methods
Biomedical image segmentation plays a vital role in diagnosis of diseases across various
organs. Deep learning-based object detection methods are commonly used for such …
organs. Deep learning-based object detection methods are commonly used for such …
BioSAM: Generating SAM Prompts From Superpixel Graph for Biological Instance Segmentation
Proposal-free instance segmentation methods have significantly advanced the field of
biological image analysis. Recently, the Segment Anything Model (SAM) has shown an …
biological image analysis. Recently, the Segment Anything Model (SAM) has shown an …
Learning cross-representation affinity consistency for sparsely supervised biomedical instance segmentation
Sparse instance-level supervision has recently been explored to address insufficient
annotation in biomedical instance segmentation, which is easier to annotate crowded …
annotation in biomedical instance segmentation, which is easier to annotate crowded …
Pctrans: Position-guided transformer with query contrast for biological instance segmentation
Recently, query-based transformer gradually draws attention in segmentation tasks due to
its powerful ability. Compared to instance segmentation in natural images, biological …
its powerful ability. Compared to instance segmentation in natural images, biological …
A 3D semantic segmentation network for accurate neuronal soma segmentation
Neuronal soma segmentation plays a crucial role in neuroscience applications. However,
the fine structure, such as boundaries, small-volume neuronal somata and fibers, are …
the fine structure, such as boundaries, small-volume neuronal somata and fibers, are …
Domain adaptive synapse detection with weak point annotations
The development of learning-based methods has greatly improved the detection of
synapses from electron microscopy (EM) images. However, training a model for each …
synapses from electron microscopy (EM) images. However, training a model for each …
Efficient Neuron Segmentation in Electron Microscopy by Affinity-Guided Queries
Accurate segmentation of neurons in electron microscopy (EM) images plays a crucial role
in understanding the intricate wiring patterns of the brain. Existing automatic neuron …
in understanding the intricate wiring patterns of the brain. Existing automatic neuron …