Machine learning for antimicrobial peptide identification and design
Artificial intelligence (AI) and machine learning (ML) models are being deployed in many
domains of society and have recently reached the field of drug discovery. Given the …
domains of society and have recently reached the field of drug discovery. Given the …
Immunoinformatics and vaccine development: an overview
AN Oli, WO Obialor, MO Ifeanyichukwu… - ImmunoTargets and …, 2020 - Taylor & Francis
The use of vaccines have resulted in a remarkable improvement in global health. It has
saved several lives, reduced treatment costs and raised the quality of animal and human …
saved several lives, reduced treatment costs and raised the quality of animal and human …
[HTML][HTML] Targeting aquaporin-4 subcellular localization to treat central nervous system edema
Swelling of the brain or spinal cord (CNS edema) affects millions of people every year. All
potential pharmacological interventions have failed in clinical trials, meaning that symptom …
potential pharmacological interventions have failed in clinical trials, meaning that symptom …
PEP-FOLD4: A pH-dependent force field for peptide structure prediction in aqueous solution
Accurate and fast structure prediction of peptides of less 40 amino acids in aqueous solution
has many biological applications, but their conformations are pH-and salt concentration …
has many biological applications, but their conformations are pH-and salt concentration …
Benchmarking AlphaFold2 on peptide structure prediction
Recent advancements in computational tools have allowed protein structure prediction with
high accuracy. Computational prediction methods have been used for modeling many …
high accuracy. Computational prediction methods have been used for modeling many …
HPEPDOCK: a web server for blind peptide–protein docking based on a hierarchical algorithm
Protein–peptide interactions are crucial in many cellular functions. Therefore, determining
the structure of protein–peptide complexes is important for understanding the molecular …
the structure of protein–peptide complexes is important for understanding the molecular …
Hydrogen-bonds mediate liquid-liquid phase separation of mussel derived adhesive peptides
Marine mussels achieve strong underwater adhesion by depositing mussel foot proteins
(Mfps) that form coacervates during the protein secretion. However, the molecular …
(Mfps) that form coacervates during the protein secretion. However, the molecular …
In silico design of a novel multi-epitope vaccine against HCV infection through immunoinformatics approaches
S Ahmad, FM Demneh, B Rehman, TN Almanaa… - International journal of …, 2024 - Elsevier
Infection with the hepatitis C virus (HCV) is one of the causes of liver cancer, which is the
world's sixth most prevalent and third most lethal cancer. The current treatments do not …
world's sixth most prevalent and third most lethal cancer. The current treatments do not …
Pragmatic coarse-graining of proteins: models and applications
The molecular details involved in the folding, dynamics, organization, and interaction of
proteins with other molecules are often difficult to assess by experimental techniques …
proteins with other molecules are often difficult to assess by experimental techniques …
Material-specific binding peptides empower sustainable innovations in plant health, biocatalysis, medicine and microplastic quantification
M Mao, L Ahrens, J Luka, F Contreras… - Chemical Society …, 2024 - pubs.rsc.org
Material-binding peptides (MBPs) have emerged as a diverse and innovation-enabling class
of peptides in applications such as plant-/human health, immobilization of catalysts …
of peptides in applications such as plant-/human health, immobilization of catalysts …