Indexing highly repetitive string collections, part II: Compressed indexes

G Navarro - ACM Computing Surveys (CSUR), 2021 - dl.acm.org
Two decades ago, a breakthrough in indexing string collections made it possible to
represent them within their compressed space while at the same time offering indexed …

Prediction of protein function from protein sequence and structure

JC Whisstock, AM Lesk - Quarterly reviews of biophysics, 2003 - cambridge.org
1. Introduction 3082. Plan of this article 3123. Natural mechanisms of development of novel
protein functions 3133.1 Divergence 3133.2 Recruitment 3163.3 'Mixing and matching'of …

[LIBRO][B] Modern information retrieval

R Baeza-Yates, B Ribeiro-Neto - 1999 - people.ischool.berkeley.edu
Information retrieval (IR) has changed considerably in recent years with the expansion of the
World Wide Web and the advent of modern and inexpensive graphical user interfaces and …

[LIBRO][B] The algorithm design manual

SS Skiena - 1998 - Springer
This newly expanded and updated second edition of the best-selling classic continues to
take the" mystery" out of designing algorithms, and analyzing their efficacy and efficiency …

[LIBRO][B] Natural language processing for historical texts

M Piotrowski - 2012 - books.google.com
More and more historical texts are becoming available in digital form. Digitization of paper
documents is motivated by the aim of preserving cultural heritage and making it more …

Linear work suffix array construction

J Kärkkäinen, P Sanders, S Burkhardt - Journal of the ACM (JACM), 2006 - dl.acm.org
Suffix trees and suffix arrays are widely used and largely interchangeable index structures
on strings and sequences. Practitioners prefer suffix arrays due to their simplicity and space …

[LIBRO][B] Algorithms and theory of computation handbook, volume 2: special topics and techniques

MJ Atallah, M Blanton - 2009 - books.google.com
This handbook provides an up-to-date compendium of fundamental computer science
topics, techniques, and applications. Along with updating and revising many of the existing …

[LIBRO][B] Computer science handbook

AB Tucker - 2004 - taylorfrancis.com
When you think about how far and fast computer science has progressed in recent years, it's
not hard to conclude that a seven-year old handbook may fall a little short of the kind of …

[LIBRO][B] Handbook of data structures and applications

DP Mehta, S Sahni - 2004 - taylorfrancis.com
Although there are many advanced and specialized texts and handbooks on algorithms,
until now there was no book that focused exclusively on the wide variety of data structures …

[LIBRO][B] Genome-scale algorithm design

V Mäkinen, D Belazzougui, F Cunial, AI Tomescu - 2015 - books.google.com
High-throughput sequencing has revolutionised the field of biological sequence analysis. Its
application has enabled researchers to address important biological questions, often for the …