Eleven grand challenges in single-cell data science

D Lähnemann, J Köster, E Szczurek, DJ McCarthy… - Genome biology, 2020 - Springer
The recent boom in microfluidics and combinatorial indexing strategies, combined with low
sequencing costs, has empowered single-cell sequencing technology. Thousands—or even …

An evolutionary perspective on field cancerization

K Curtius, NA Wright, TA Graham - Nature Reviews Cancer, 2018 - nature.com
Tumorigenesis begins long before the growth of a clinically detectable lesion and, indeed,
even before any of the usual morphological correlates of pre-malignancy are recognizable …

A spatial model predicts that dispersal and cell turnover limit intratumour heterogeneity

B Waclaw, I Bozic, ME Pittman, RH Hruban… - Nature, 2015 - nature.com
Most cancers in humans are large, measuring centimetres in diameter, and composed of
many billions of cells. An equivalent mass of normal cells would be highly heterogeneous as …

Turning ecology and evolution against cancer

KS Korolev, JB Xavier, J Gore - Nature Reviews Cancer, 2014 - nature.com
The fight against cancer has drawn researchers from a wide variety of disciplines, ranging
from molecular biology to physics, but the perspective of an ecological theorist has been …

The heterogeneity of prostate cancer: a practical approach

Y Tolkach, G Kristiansen - Pathobiology, 2018 - karger.com
Prostate cancer is a paradigm tumor model for heterogeneity in almost every sense. Its
clinical, spatial, and morphological heterogeneity divided by the high-level molecular …

Experimental evolution in biofilm populations

HP Steenackers, I Parijs, KR Foster… - FEMS microbiology …, 2016 - academic.oup.com
Biofilms are a major form of microbial life in which cells form dense surface associated
communities that can persist for many generations. The long-life of biofilm communities …

[HTML][HTML] Tumour cell heterogeneity

L Gay, AM Baker, TA Graham - F1000Research, 2016 - ncbi.nlm.nih.gov
The population of cells that make up a cancer are manifestly heterogeneous at the genetic,
epigenetic, and phenotypic levels. In this mini-review, we summarise the extent of intra …

Mutational Pathway Determines Whether Drug Gradients Accelerate<? format?> Evolution of Drug-Resistant Cells

P Greulich, B Waclaw, RJ Allen - Physical review letters, 2012 - APS
Drug gradients are believed to play an important role in the evolution of bacteria resistant to
antibiotics and tumors resistant to anticancer drugs. We use a statistical physics model to …

Lineage tracing reveals multipotent stem cells maintain human adenomas and the pattern of clonal expansion in tumor evolution

A Humphries, B Cereser, LJ Gay… - Proceedings of the …, 2013 - National Acad Sciences
The genetic and morphological development of colorectal cancer is a paradigm for
tumorigenesis. However, the dynamics of clonal evolution underpinning carcinogenesis …

Cutting through the complexity of cell collectives

CD Nadell, V Bucci, K Drescher… - … of the Royal …, 2013 - royalsocietypublishing.org
Via strength in numbers, groups of cells can influence their environments in ways that
individual cells cannot. Large-scale structural patterns and collective functions underpinning …