MicroRNA and transcription factor: key players in plant regulatory network

AFA Samad, M Sajad, N Nazaruddin, IA Fauzi… - Frontiers in plant …, 2017 - frontiersin.org
Recent achievements in plant microRNA (miRNA), a large class of small and non-coding
RNAs, are very exciting. A wide array of techniques involving forward genetic, molecular …

Identifying miRNAs, targets and functions

B Liu, J Li, MJ Cairns - Briefings in bioinformatics, 2014 - academic.oup.com
Abstract microRNAs (miRNAs) are small endogenous non-coding RNAs that function as the
universal specificity factors in post-transcriptional gene silencing. Discovering miRNAs …

Elucidating MicroRNA regulatory networks using transcriptional, post-transcriptional, and histone modification measurements

SJC Gosline, AM Gurtan, CK JnBaptiste, A Bosson… - Cell reports, 2016 - cell.com
MicroRNAs (miRNAs) regulate diverse biological processes by repressing mRNAs, but their
modest effects on direct targets, together with their participation in larger regulatory …

Reproducible combinatorial regulatory networks elucidate novel oncogenic microRNAs in non-small cell lung cancer

R Mitra, MD Edmonds, J Sun, M Zhao, H Yu… - Rna, 2014 - rnajournal.cshlp.org
While previous studies reported aberrant expression of microRNAs (miRNAs) in non-small
cell lung cancer (NSCLC), little is known about which miRNAs play central roles in NSCLC's …

MicroRNA target prediction tools for animals: Where we are at and where we are going to-A systematic review

RMMW Feitosa, P Prieto-Oliveira, H Brentani… - … Biology and Chemistry, 2022 - Elsevier
MicroRNAs (miRNAs) are non-coding RNAs containing 19–26 nucleotides, and they directly
regulate the translation of mRNAs by binding to them. MiRNAs participate in various …

Rigorous assessment of gene set enrichment tests

H Naeem, R Zimmer, P Tavakkolkhah… - Bioinformatics, 2012 - academic.oup.com
Motivation: Several statistical tests are available to detect the enrichment of differential
expression in gene sets. Such tests were originally proposed for analyzing gene sets …

miRNAs and genes as molecular regulators of rice grain morphology and yield

S Kumar, N Sharma, SK Sopory… - Plant Physiology and …, 2024 - Elsevier
Rice is one of the most consumed crops worldwide and the genetic and molecular basis of
its grain yield attributes are well understood. Various studies have identified different yield …

Genome‐wide uncovering of STAT3‐mediated miRNA expression profiles in colorectal cancer cell lines

J Zhang, X Luo, H Li, L Deng… - BioMed Research …, 2014 - Wiley Online Library
Colorectal cancer (CRC) is one of the most common malignancies resulting in high mortality
worldwide. Signal transducer and activator of transcription 3 (STAT3) is an oncogenic …

[HTML][HTML] MicroRNA-34a-5p regulates agouti-related peptide via krüppel-like factor 4 and is disrupted by bisphenol A in hypothalamic neurons

M Yu, W He, DD Belsham - Gene, 2025 - Elsevier
Obesity is a complex disease marked by increased adiposity and impaired metabolic
function. While diet and lifestyle are primary causes, endocrine-disrupting chemicals …

microRNA and gene networks in human pancreatic cancer

M Zhu, Z Xu, K Wang, N Wang, Y Li - Oncology Letters, 2013 - spandidos-publications.com
To date, scientists have obtained a substantial amount of knowledge with regard to genes
and microRNAs (miRNAs) in pancreatic cancer (PC). However, deciphering the regulatory …