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Best practices for analysing microbiomes
Complex microbial communities shape the dynamics of various environments, ranging from
the mammalian gastrointestinal tract to the soil. Advances in DNA sequencing technologies …
the mammalian gastrointestinal tract to the soil. Advances in DNA sequencing technologies …
Multi-omic integration of microbiome data for identifying disease-associated modules
Multi-omic studies of the human gut microbiome are crucial for understanding its role in
disease across multiple functional layers. Nevertheless, integrating and analyzing such …
disease across multiple functional layers. Nevertheless, integrating and analyzing such …
[KNIHA][B] Multivariate data integration using R: methods and applications with the mixOmics package
KA Lê Cao, ZM Welham - 2021 - taylorfrancis.com
Large biological data, which are often noisy and high-dimensional, have become
increasingly prevalent in biology and medicine. There is a real need for good training in …
increasingly prevalent in biology and medicine. There is a real need for good training in …
The changes of immunoglobulin G N-glycosylation in blood lipids and dyslipidaemia
D Liu, X Chu, H Wang, J Dong, SQ Ge, ZY Zhao… - Journal of translational …, 2018 - Springer
Background Alternative N-glycosylation has significant structural and functional
consequences on immunoglobulin G (IgG) and can affect immune responses, acting as a …
consequences on immunoglobulin G (IgG) and can affect immune responses, acting as a …
The statistical theory of linear selection indices from phenotypic to genomic selection
A linear selection index (LSI) can be a linear combination of phenotypic values, marker
scores, and genomic estimated breeding values (GEBVs); phenotypic values and marker …
scores, and genomic estimated breeding values (GEBVs); phenotypic values and marker …
sjive: Supervised joint and individual variation explained
EF Palzer, CH Wendt, RP Bowler, CP Hersh… - … statistics & data analysis, 2022 - Elsevier
Analyzing multi-source data, which are multiple views of data on the same subjects, has
become increasingly common in molecular biomedical research. Recent methods have …
become increasingly common in molecular biomedical research. Recent methods have …
Multi-region brain transcriptomes uncover two subtypes of aging individuals with differences in Alzheimer risk and the impact of APOEε4
The heterogeneity of the older population suggests the existence of subsets of individuals
which share certain brain molecular features and respond differently to risk factors for …
which share certain brain molecular features and respond differently to risk factors for …
Searching for a technology-driven acute rheumatic fever test: the START study protocol
Introduction The absence of a diagnostic test for acute rheumatic fever (ARF) is a major
impediment in managing this serious childhood condition. ARF is an autoimmune condition …
impediment in managing this serious childhood condition. ARF is an autoimmune condition …
Longitudinal canonical correlation analysis
This paper considers canonical correlation analysis for two longitudinal variables that are
possibly sampled at different time resolutions with irregular grids. We modelled trajectories …
possibly sampled at different time resolutions with irregular grids. We modelled trajectories …
Model-based joint visualization of multiple compositional omics datasets
The integration of multiple omics datasets measured on the same samples is a challenging
task: data come from heterogeneous sources and vary in signal quality. In addition, some …
task: data come from heterogeneous sources and vary in signal quality. In addition, some …