RNA-Seq technology and its application in fish transcriptomics

X Qian, Y Ba, Q Zhuang, G Zhong - Omics: a journal of integrative …, 2014 - liebertpub.com
High-throughput sequencing technologies, also known as next-generation sequencing
(NGS) technologies, have revolutionized the way that genomic research is advancing. In …

The utility of transcriptomics in fish conservation

RE Connon, KM Jeffries… - Journal of …, 2018 - journals.biologists.com
There is growing recognition of the need to understand the mechanisms underlying
organismal resilience (ie tolerance, acclimatization) to environmental change to support the …

Transcriptome and Molecular Pathway Analysis of the Hepatopancreas in the Pacific White Shrimp Litopenaeus vannamei under Chronic Low-Salinity Stress

K Chen, E Li, T Li, C Xu, X Wang, H Lin, JG Qin… - PLoS …, 2015 - journals.plos.org
The Pacific white shrimp Litopenaeus vannamei is a euryhaline penaeid species that shows
ontogenetic adaptations to salinity, with its larvae inhabiting oceanic environments and …

The use of non-lethal sampling for transcriptomics to assess the physiological status of wild fishes

KM Jeffries, A Teffer, S Michaleski, NJ Bernier… - … and Physiology Part B …, 2021 - Elsevier
Fishes respond to different abiotic and biotic stressors through changes in gene expression
as a part of an integrated physiological response. Transcriptomics approaches have been …

Effects of high temperatures on threatened estuarine fishes during periods of extreme drought

KM Jeffries, RE Connon, BE Davis… - Journal of …, 2016 - journals.biologists.com
Climate change and associated increases in water temperatures may impact physiological
performance in ectotherms and exacerbate endangered species declines. We used an …

Transcriptome analysis revealed changes of multiple genes involved in immunity in Cynoglossus semilaevis during Vibrio anguillarum infection

X Zhang, S Wang, S Chen, Y Chen, Y Liu… - Fish & shellfish …, 2015 - Elsevier
Half-smooth tongue sole (Cynoglossus semilaevis) is one of the most valuable marine
aquatic species in Northern China. Given to the rapid development of aquaculture industry …

Aquaculture omics: An update on the current status of research and data analysis

JK Sundaray, S Dixit, A Rather, KD Rasal, L Sahoo - Marine Genomics, 2022 - Elsevier
Aquaculture is the fast-growing agricultural sector and has the ability to meet the growing
demand for protein nutritional security for future population. In future aquaculture is going to …

Forced sustained swimming exercise at optimal speed enhances growth of juvenile yellowtail kingfish (Seriola lalandi)

AP Palstra, D Mes, K Kusters, JAC Roques… - Frontiers in …, 2015 - frontiersin.org
Swimming exercise at optimal speed may optimize growth performance of yellowtail kingfish
in a recirculating aquaculture system. Therefore, optimal swimming speeds (U opt in ms− 1 …

Transcriptome analysis of the growth performance of hybrid mandarin fish after food conversion

WZ Guan, GF Qiu - PloS One, 2020 - journals.plos.org
During recent years, China has become a hotspot for the domestication of mandarin fish,
and this is of great commercial value. Although the food preference of domesticated …

Muscle growth and plasticity in teleost fish: the significance of evolutionarily diverse sarcomeric proteins

W Joyce - Reviews in Fish Biology and Fisheries, 2023 - Springer
The skeletal muscle of teleost fish is remarkable in its capacity for indeterminate growth and
phenotypic plasticity to function across different environmental conditions. Generation of the …