Mass spectrometry-based protein footprinting for higher-order structure analysis: fundamentals and applications

XR Liu, MM Zhang, ML Gross - Chemical reviews, 2020 - ACS Publications
Proteins adopt different higher-order structures (HOS) to enable their unique biological
functions. Understanding the complexities of protein higher-order structures and dynamics …

[HTML][HTML] Evolution of molluscan hemocyanin structures

J Markl - Biochimica et Biophysica Acta (BBA)-Proteins and …, 2013 - Elsevier
Hemocyanin transports oxygen in the hemolymph of many molluscs and arthropods and is
therefore a central physiological factor in these animals. Molluscan hemocyanin molecules …

[HTML][HTML] High-resolution noise substitution to measure overfitting and validate resolution in 3D structure determination by single particle electron cryomicroscopy

S Chen, G McMullan, AR Faruqi, GN Murshudov… - Ultramicroscopy, 2013 - Elsevier
Abstract Three-dimensional (3D) structure determination by single particle electron
cryomicroscopy (cryoEM) involves the calculation of an initial 3D model, followed by …

Atomic model of the F420-reducing [NiFe] hydrogenase by electron cryo-microscopy using a direct electron detector

M Allegretti, DJ Mills, G McMullan, W Kühlbrandt… - Elife, 2014 - elifesciences.org
The introduction of direct electron detectors with higher detective quantum efficiency and fast
read-out marks the beginning of a new era in electron cryo-microscopy. Using the FEI …

Cryo-electron microscopy and X-ray crystallography: complementary approaches to structural biology and drug discovery

C Vénien-Bryan, Z Li, L Vuillard… - Structural Biology and …, 2017 - journals.iucr.org
The invention of the electron microscope has greatly enhanced the view scientists have of
small structural details. Since its implementation, this technology has undergone …

Transmission electron microscopy in molecular structural biology: a historical survey

JR Harris - Archives of biochemistry and biophysics, 2015 - Elsevier
In this personal, historic account of macromolecular transmission electron microscopy
(TEM), published data from the 1940s through to recent times is surveyed, within the context …

Molluscan hemocyanin: structure, evolution, and physiology

S Kato, T Matsui, C Gatsogiannis, Y Tanaka - Biophysical reviews, 2018 - Springer
Most molluscs have blue blood because their respiratory molecule is hemocyanin, a type-3
copper-binding protein that turns blue upon oxygen binding. Molluscan hemocyanins are …

Structural insights into a functional unit from an immunogenic mollusk hemocyanin

SM Muñoz, G Vallejos-Baccelliere, A Manubens… - Structure, 2024 - cell.com
Mollusk hemocyanins, among the largest known proteins, are used as immunostimulants in
biomedical and clinical applications. The hemocyanin of the Chilean gastropod …

Protein-metal-ion interactions studied by mass spectrometry-based footprinting with isotope-encoded benzhydrazide

C Guo, M Cheng, ML Gross - Analytical chemistry, 2018 - ACS Publications
Metal ions, usually bound by various amino-acid side chains in proteins, play multiple roles
in protein folding, conformational change, cellular communication, and catalysis. Ca (II) and …

Crystal structure of the 3.8-MDa respiratory supermolecule hemocyanin at 3.0 Å resolution

Z Gai, A Matsuno, K Kato, S Kato, MRI Khan, T Shimizu… - Structure, 2015 - cell.com
Molluscan hemocyanin, a copper-containing oxygen transporter, is one of the largest known
proteins. Although molluscan hemocyanins are currently applied as immunotherapeutic …