Polyploidy: its consequences and enabling role in plant diversification and evolution

JS Heslop-Harrison, T Schwarzacher, Q Liu - Annals of Botany, 2023 - academic.oup.com
Background Most, if not all, green plant (Virdiplantae) species including angiosperms and
ferns are polyploids themselves or have ancient polyploid or whole genome duplication …

Polyploidy and interspecific hybridization: partners for adaptation, speciation and evolution in plants

K Alix, PR Gérard, T Schwarzacher… - Annals of …, 2017 - academic.oup.com
Background Polyploidy or whole-genome duplication is now recognized as being present in
almost all lineages of higher plants, with multiple rounds of polyploidy occurring in most …

One thousand plant transcriptomes and the phylogenomics of green plants

Nature, 2019 - nature.com
Green plants (Viridiplantae) include around 450,000–500,000 species, of great diversity and
have important roles in terrestrial and aquatic ecosystems. Here, as part of the One …

agriGO v2. 0: a GO analysis toolkit for the agricultural community, 2017 update

T Tian, Y Liu, H Yan, Q You, X Yi, Z Du… - Nucleic acids …, 2017 - academic.oup.com
The agriGO platform, which has been serving the scientific community for> 10 years,
specifically focuses on gene ontology (GO) enrichment analyses of plant and agricultural …

Genomic evidence for rediploidization and adaptive evolution following the whole-genome triplication

X Feng, Q Chen, W Wu, J Wang, G Li, S Xu… - Nature …, 2024 - nature.com
Abstract Whole-genome duplication (WGD), or polyploidy, events are widespread and
significant in the evolutionary history of angiosperms. However, empirical evidence for …

[HTML][HTML] Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding

Y Wu, D Li, Y Hu, H Li, GP Ramstein, S Zhou, X Zhang… - Cell, 2023 - cell.com
Hybrid potato breeding will transform the crop from a clonally propagated tetraploid to a
seed-reproducing diploid. Historical accumulation of deleterious mutations in potato …

Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants

X Qiao, Q Li, H Yin, K Qi, L Li, R Wang, S Zhang… - Genome biology, 2019 - Springer
Background The sharp increase of plant genome and transcriptome data provide valuable
resources to investigate evolutionary consequences of gene duplication in a range of taxa …

A second update to the checklist of the vascular flora alien to Italy

G Galasso, F Conti, L Peruzzi… - Plant Biosystems-An …, 2024 - Taylor & Francis
Critical and updated alien species inventories are crucial to properly manage and contrast
biological invasions. After 6 years, a second update to the inventory of the vascular flora …

Revealing evolution of tropane alkaloid biosynthesis by analyzing two genomes in the Solanaceae family

F Zhang, F Qiu, J Zeng, Z Xu, Y Tang, T Zhao… - Nature …, 2023 - nature.com
Tropane alkaloids (TAs) are widely distributed in the Solanaceae, while some important
medicinal tropane alkaloids (mTAs), such as hyoscyamine and scopolamine, are restricted …

Tomato root specialized metabolites evolved through gene duplication and regulatory divergence within a biosynthetic gene cluster

RE Kerwin, JE Hart, PD Fiesel, YR Lou, P Fan… - Science …, 2024 - science.org
Tremendous plant metabolic diversity arises from phylogenetically restricted specialized
metabolic pathways. Specialized metabolites are synthesized in dedicated cells or tissues …