Best practices for QSAR model development, validation, and exploitation

A Tropsha - Molecular informatics, 2010 - Wiley Online Library
After nearly five decades “in the making”, QSAR modeling has established itself as one of
the major computational molecular modeling methodologies. As any mature research …

Quantitative structure–selectivity relationships in enantioselective catalysis: past, present, and future

AF Zahrt, SV Athavale, SE Denmark - Chemical reviews, 2019 - ACS Publications
The dawn of the 21st century has brought with it a surge of research related to computer-
guided approaches to catalyst design. In the past two decades, chemoinformatics, the …

Beware of q2!

A Golbraikh, A Tropsha - Journal of molecular graphics and modelling, 2002 - Elsevier
Validation is a crucial aspect of any quantitative structure–activity relationship (QSAR)
modeling. This paper examines one of the most popular validation criteria, leave-one-out …

The Zagreb indices 30 years after

S Nikolić, G Kovačević, A Miličević… - Croatica chemica acta, 2003 - hrcak.srce.hr
The original formulation of the Zagreb indices is presented and their relationship to
topological indices such as self-returning walks, Platt, Gordon-Scantlebury and connectivity …

Predictive QSAR modeling based on diversity sampling of experimental datasets for the training and test set selection

A Golbraikh, A Tropsha - Molecular diversity, 2000 - Springer
One of the most important characteristics of Quantitative Structure ActivityRelashionships
(QSAR) models is their predictive power. The latter can bedefined as the ability of a model to …

[BUCH][B] Chemical reactivity theory: a density functional view

PK Chattaraj - 2009 - taylorfrancis.com
In the 1970s, Density Functional Theory (DFT) was borrowed from physics and adapted to
chemistry by a handful of visionaries. Now chemical DFT is a diverse and rapidly growing …

Predictive QSAR modeling workflow, model applicability domains, and virtual screening

A Tropsha, A Golbraikh - Current pharmaceutical design, 2007 - ingentaconnect.com
Quantitative Structure Activity Relationship (QSAR) modeling has been traditionally applied
as an evaluative approach, ie, with the focus on develo** retrospective and explanatory …

On reformulated Zagreb indices

A Miličević, S Nikolić, N Trinajstić - Molecular diversity, 2004 - Springer
Zagreb indices were reformulated in terms of the edge-degrees instead of the vertex-
degrees as the original Zagreb indices. Three types of Zagreb indices were considered …

[BUCH][B] Graph-theoretical matrices in chemistry

D Janezic, A Milicevic, S Nikolic, N Trinajstic - 2015 - books.google.com
Divided into five sections, this book offers 200 graph-theoretical matrices covering
adjacency and related matrices, distance and related matrices, incidence matrices, and …

Two-dimensional coronene fractal structures: topological entropy measures, energetics, NMR and ESR spectroscopic patterns and existence of isentropic structures

M Arockiaraj, J Jency, J Abraham… - Molecular …, 2022 - Taylor & Francis
Molecular fractals are geometric patterns that appear self-similar across all length scales
and are constructed by repeating a single unit on a regular basis. The benzenoid …