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Reaction mechanisms and kinetics of nanozymes: insights from theory and computation
X Shen, Z Wang, XJ Gao, X Gao - Advanced Materials, 2024 - Wiley Online Library
Abstract “Nanozymes” usually refers to inorganic nanomaterials with enzyme‐like catalytic
activities. The research into nanozymes is one of the hot topics on the horizon of …
activities. The research into nanozymes is one of the hot topics on the horizon of …
Computer-aided understanding and engineering of enzymatic selectivity
L Wu, L Qin, Y Nie, Y Xu, YL Zhao - Biotechnology Advances, 2022 - Elsevier
Abstract Enzymes offering chemo-, regio-, and stereoselectivity enable the asymmetric
synthesis of high-value chiral molecules. Unfortunately, the drawback that naturally …
synthesis of high-value chiral molecules. Unfortunately, the drawback that naturally …
Tailored Metal–Organic Framework‐Based Nanozymes for Enhanced Enzyme‐Like Catalysis
Z Yu, Z Xu, R Zeng, M Xu, M Zou, D Huang… - Angewandte …, 2024 - Wiley Online Library
The global crisis of bacterial infections is exacerbated by the escalating threat of microbial
antibiotic resistance. Nanozymes promise to provide ingenious solutions. Here, we reported …
antibiotic resistance. Nanozymes promise to provide ingenious solutions. Here, we reported …
Modeling enzymatic enantioselectivity using quantum chemical methodology
The computational study of enantioselective reactions is a challenging task that requires
high accuracy, as very small energy differences have to be reproduced. Quantum chemical …
high accuracy, as very small energy differences have to be reproduced. Quantum chemical …
Assessment of the cruzain cysteine protease reversible and irreversible covalent inhibition mechanism
Reversible and irreversible covalent ligands are advanced cysteine protease inhibitors in
the drug development pipeline. K777 is an irreversible inhibitor of cruzain, a necessary …
the drug development pipeline. K777 is an irreversible inhibitor of cruzain, a necessary …
Tuning proton transfer thermodynamics in SARS-CoV-2 main protease: implications for catalysis and inhibitor design
The catalytic reaction in SARS-CoV-2 main protease is activated by a proton transfer (PT)
from Cys145 to His41. The same PT is likely also required for the covalent binding of some …
from Cys145 to His41. The same PT is likely also required for the covalent binding of some …
Efficient decolorization of melanoidin in raw molasses wastewater by thermophilic esterase in actual extreme conditions
Z Zhang, W Hu, Q **e, Y Shi, Y Zhao, Y Deng, J He… - Bioresource …, 2023 - Elsevier
This work was developed to explore the versatility of thermophilic esterase for decolorizing
raw molasses wastewater at high temperature and acidic pH. Combining covalent …
raw molasses wastewater at high temperature and acidic pH. Combining covalent …
[HTML][HTML] Efficient degradation of molasses wastewater from sugar mill by lipase via addition reaction
L Wei, S Wang, F Zhang, Y Fan, Y Liao, B Liao… - LWT, 2022 - Elsevier
It has been observed that hydrolases such as cutinases have made significant
breakthroughs and achieved good results in catalyzing the enzymatic decolorization of …
breakthroughs and achieved good results in catalyzing the enzymatic decolorization of …
Projector-based embedding eliminates density functional dependence for QM/MM calculations of reactions in enzymes and solution
KE Ranaghan, D Shchepanovska… - Journal of Chemical …, 2019 - ACS Publications
Combined quantum mechanics/molecular mechanics (QM/MM) methods are increasingly
widely utilized in studies of reactions in enzymes and other large systems. Here, we apply a …
widely utilized in studies of reactions in enzymes and other large systems. Here, we apply a …
Unpicking the cause of stereoselectivity in actinorhodin ketoreductase variants with atomistic simulations
Ketoreductase enzymes (KRs) with a high degree of regio-and stereoselectivity are useful
biocatalysts for the production of small, specific chiral alcohols from achiral ketones …
biocatalysts for the production of small, specific chiral alcohols from achiral ketones …