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A survey on subgraph counting: concepts, algorithms, and applications to network motifs and graphlets
Computing subgraph frequencies is a fundamental task that lies at the core of several
network analysis methodologies, such as network motifs and graphlet-based metrics, which …
network analysis methodologies, such as network motifs and graphlet-based metrics, which …
Input-output networks considering graphlet-based analysis for production optimization: Application in ethylene plants
Z Wang, Y Han, C Li, Z Geng, J Fan - Journal of Cleaner Production, 2021 - Elsevier
Complex systems and massive amounts of data present a huge challenge for modern
chemical enterprises, but traditional data statistical analysis and data mining methods have …
chemical enterprises, but traditional data statistical analysis and data mining methods have …
A review of graph-based models for entity-oriented search
Entity-oriented search tasks heavily rely on exploiting unstructured and structured
collections. Moreover, it is frequent for text corpora and knowledge bases to provide …
collections. Moreover, it is frequent for text corpora and knowledge bases to provide …
Temporal network alignment via GoT-WAVE
Motivation Network alignment (NA) finds conserved regions between two networks. NA
methods optimize node conservation (NC) and edge conservation. Dynamic graphlet …
methods optimize node conservation (NC) and edge conservation. Dynamic graphlet …
Supervised prediction of aging-related genes from a context-specific protein interaction subnetwork
Q Li, T Milenković - IEEE/ACM transactions on computational …, 2021 - ieeexplore.ieee.org
Human aging is linked to many prevalent diseases. The aging process is highly influenced
by genetic factors. Hence, it is important to identify human aging-related genes. We focus on …
by genetic factors. Hence, it is important to identify human aging-related genes. We focus on …
The power of dynamic social networks to predict individuals' mental health
Precision medicine has received attention both in and outside the clinic. We focus on the
latter, by exploiting the relationship between individuals' social interactions and their mental …
latter, by exploiting the relationship between individuals' social interactions and their mental …
Multi‐layer sequential network analysis improves protein 3D structural classification
Protein structural classification (PSC) is a supervised problem of assigning proteins into pre‐
defined structural (eg, CATH or SCOPe) classes based on the proteins' sequence or 3D …
defined structural (eg, CATH or SCOPe) classes based on the proteins' sequence or 3D …
Improved supervised prediction of aging-related genes via weighted dynamic network analysis
Background This study focuses on the task of supervised prediction of aging-related genes
from-omics data. Unlike gene expression methods for this task that capture aging-specific …
from-omics data. Unlike gene expression methods for this task that capture aging-specific …
CAGE: Cache-Aware Graphlet Enumeration
When information is (implicitly or explicitly) linked in its own nature, and is modeled as a
network, retrieving patterns can benefit from this linked structure. In networks,“graphlets” …
network, retrieving patterns can benefit from this linked structure. In networks,“graphlets” …
Graphlets over time: A new lens for temporal network analysis
Graphs are widely used for modeling various types of interactions, such as email
communications and online discussions. Many of such real-world graphs are temporal, and …
communications and online discussions. Many of such real-world graphs are temporal, and …