Innovations to culturing the uncultured microbial majority

WH Lewis, G Tahon, P Geesink, DZ Sousa… - Nature Reviews …, 2021 - nature.com
Despite the surge of microbial genome data, experimental testing is important to confirm
inferences about the cell biology, ecological roles and evolution of microorganisms. As the …

Microbial interactions: from networks to models

K Faust, J Raes - Nature Reviews Microbiology, 2012 - nature.com
Metagenomics and 16S pyrosequencing have enabled the study of ecosystem structure and
dynamics to great depth and accuracy. Co-occurrence and correlation patterns found in …

A new antibiotic kills pathogens without detectable resistance

LL Ling, T Schneider, AJ Peoples, AL Spoering… - Nature, 2015 - nature.com
Antibiotic resistance is spreading faster than the introduction of new compounds into clinical
practice, causing a public health crisis. Most antibiotics were produced by screening soil …

[HTML][HTML] The science of antibiotic discovery

K Lewis - Cell, 2020 - cell.com
We are experiencing an antimicrobial resistance (AMR) crisis, brought on by the drying up of
the antibiotic discovery pipeline and the resulting unchecked spread of resistant pathogens …

Culturing the human microbiota and culturomics

JC Lagier, G Dubourg, M Million, F Cadoret… - Nature Reviews …, 2018 - nature.com
The gut microbiota has an important role in the maintenance of human health and in disease
pathogenesis. This importance was realized through the advent of omics technologies and …

Platforms for antibiotic discovery

K Lewis - Nature reviews Drug discovery, 2013 - nature.com
The spread of resistant bacteria, leading to untreatable infections, is a major public health
threat but the pace of antibiotic discovery to combat these pathogens has slowed down …

Rethinking crop nutrition in times of modern microbiology: innovative biofertilizer technologies

EK Mitter, M Tosi, D Obregón, KE Dunfield… - … in Sustainable Food …, 2021 - frontiersin.org
Global population growth poses a threat to food security in an era of increased ecosystem
degradation, climate change, soil erosion, and biodiversity loss. In this context, harnessing …

Discovery of microbial natural products by activation of silent biosynthetic gene clusters

PJ Rutledge, GL Challis - Nature reviews microbiology, 2015 - nature.com
Microorganisms produce a wealth of structurally diverse specialized metabolites with a
remarkable range of biological activities and a wide variety of applications in medicine and …

Microbial seed banks: the ecological and evolutionary implications of dormancy

JT Lennon, SE Jones - Nature reviews microbiology, 2011 - nature.com
Dormancy is a bet-hedging strategy used by a wide range of taxa, including
microorganisms. It refers to an organism's ability to enter a reversible state of low metabolic …

Challenges of antibacterial discovery

LL Silver - Clinical microbiology reviews, 2011 - Am Soc Microbiol
The discovery of novel small-molecule antibacterial drugs has been stalled for many years.
The purpose of this review is to underscore and illustrate those scientific problems unique to …