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RNA structure: advances and assessment of 3D structure prediction
Biological functions of RNA molecules are dependent upon sustained specific three-
dimensional (3D) structures of RNA, with or without the help of proteins. Understanding of …
dimensional (3D) structures of RNA, with or without the help of proteins. Understanding of …
Thermostability, tunability, and tenacity of RNA as rubbery anionic polymeric materials in nanotechnology and nanomedicine—specific cancer targeting with …
RNA nanotechnology is the bottom-up self-assembly of nanometer-scale architectures,
resembling LEGOs, composed mainly of RNA. The ideal building material should be (1) …
resembling LEGOs, composed mainly of RNA. The ideal building material should be (1) …
[PDF][PDF] New functionality of RNAComposer: an application to shape the axis of miR160 precursor structure
RNAComposer is a fully automated, web-interfaced system for RNA 3D structure prediction,
freely available at http://rnacomposer. cs. put. poznan. pl/and http://rnacomposer. ibch …
freely available at http://rnacomposer. cs. put. poznan. pl/and http://rnacomposer. ibch …
Cryo-EM structure of human dicer and its complexes with a pre-miRNA substrate
Human Dicer (hDicer) is a multi-domain protein belonging to the RNase III family. It plays
pivotal roles in small RNA biogenesis during the RNA interference (RNAi) pathway by …
pivotal roles in small RNA biogenesis during the RNA interference (RNAi) pathway by …
RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme
RNA-Puzzles is a collective experiment in blind 3D RNA structure prediction. We report here
a third round of RNA-Puzzles. Five puzzles, 4, 8, 12, 13, 14, all structures of riboswitch …
a third round of RNA-Puzzles. Five puzzles, 4, 8, 12, 13, 14, all structures of riboswitch …
Computer-aided design of RNA-targeted small molecules: A growing need in drug discovery
In recent years, researchers have identified certain RNAs as druggable targets for small
molecules to treat several human pathologies. However, these regulatory RNAs are …
molecules to treat several human pathologies. However, these regulatory RNAs are …
High content design of riboswitch biosensors: All-around rational module-by-module design
Y Wu, L Zhu, S Li, H Chu, X Wang, W Xu - Biosensors and Bioelectronics, 2023 - Elsevier
Riboswitches are ideal, diverse regulatory elements with simple mechanisms. Therefore,
they are widely employed in synthetic biology to construct highly efficient biosensors for …
they are widely employed in synthetic biology to construct highly efficient biosensors for …
rRNA expansion segment 7 in eukaryotes: from Signature Fold to tentacles
The ribosomal core is universally conserved across the tree of life. However, eukaryotic
ribosomes contain diverse rRNA expansion segments (ESs) on their surfaces. Sites of ES …
ribosomes contain diverse rRNA expansion segments (ESs) on their surfaces. Sites of ES …
Entanglements of structure elements revealed in RNA 3D models
Computational methods to predict RNA 3D structure have more and more practical
applications in molecular biology and medicine. Therefore, it is crucial to intensify efforts to …
applications in molecular biology and medicine. Therefore, it is crucial to intensify efforts to …
RNAComposer and RNA 3D structure prediction for nanotechnology
M Biesiada, K Pachulska-Wieczorek, RW Adamiak… - Methods, 2016 - Elsevier
RNAs adopt specific, stable tertiary architectures to perform their activities. Knowledge of
RNA tertiary structure is fundamental to understand RNA functions beginning with …
RNA tertiary structure is fundamental to understand RNA functions beginning with …