Transcriptional Regulation in Saccharomyces cerevisiae: Transcription Factor Regulation and Function, Mechanisms of Initiation, and Roles of Activators and …

S Hahn, ET Young - Genetics, 2011 - academic.oup.com
Here we review recent advances in understanding the regulation of mRNA synthesis in
Saccharomyces cerevisiae. Many fundamental gene regulatory mechanisms have been …

What are DNA sequence motifs?

P D'haeseleer - Nature biotechnology, 2006 - nature.com
Sequence motifs are becoming increasingly important in the analysis of gene regulation.
How do we define sequence motifs, and why should we use sequence logos instead of …

A recently evolved transcriptional network controls biofilm development in Candida albicans

CJ Nobile, EP Fox, JE Nett, TR Sorrells, QM Mitrovich… - Cell, 2012 - cell.com
A biofilm is an organized, resilient group of microbes in which individual cells acquire
properties, such as drug resistance, that are distinct from those observed in suspension …

YEASTRACT+: a portal for cross-species comparative genomics of transcription regulation in yeasts

PT Monteiro, J Oliveira, P Pais, M Antunes… - Nucleic acids …, 2020 - academic.oup.com
The YEASTRACT+ information system (http://YEASTRACT-PLUS. org/) is a wide-scope tool
for the analysis and prediction of transcription regulatory associations at the gene and …

YEASTRACT+: a portal for the exploitation of global transcription regulation and metabolic model data in yeast biotechnology and pathogenesis

MC Teixeira, R Viana, M Palma, J Oliveira… - Nucleic Acids …, 2023 - academic.oup.com
Abstract YEASTRACT+ (http://yeastract-plus. org/) is a tool for the analysis, prediction and
modelling of transcription regulatory data at the gene and genomic levels in yeasts. It …

A Phenotypic Profile of the Candida albicans Regulatory Network

OR Homann, J Dea, SM Noble, AD Johnson - PLoS genetics, 2009 - journals.plos.org
Candida albicans is a normal resident of the gastrointestinal tract and also the most
prevalent fungal pathogen of humans. It last shared a common ancestor with the model …

Glucose starvation induces a switch in the histone acetylome for activation of gluconeogenic and fat metabolism genes

WC Hsieh, BM Sutter, H Ruess, SD Barnes, VS Malladi… - Molecular cell, 2022 - cell.com
Acetyl-CoA is a key intermediate situated at the intersection of many metabolic pathways.
The reliance of histone acetylation on acetyl-CoA enables the coordination of gene …

The sponge microbiome project

L Moitinho-Silva, S Nielsen, A Amir, A Gonzalez… - …, 2017 - academic.oup.com
Rhododendron delavayi Franch. is globally famous as an ornamental plant. Its distribution in
southwest China covers several different habitats and environments. However, not much …

A comprehensive analysis of replicative lifespan in 4,698 single-gene deletion strains uncovers conserved mechanisms of aging

MA McCormick, JR Delaney, M Tsuchiya… - Cell metabolism, 2015 - cell.com
Many genes that affect replicative lifespan (RLS) in the budding yeast Saccharomyces
cerevisiae also affect aging in other organisms such as C. elegans and M. musculus. We …

YEASTRACT: an upgraded database for the analysis of transcription regulatory networks in Saccharomyces cerevisiae

MC Teixeira, PT Monteiro, M Palma… - Nucleic acids …, 2018 - academic.oup.com
Abstract The YEAst Search for Transcriptional Regulators And Consensus Tracking
(YEASTRACT—www. yeastract. com) information system has been, for 11 years, a key tool …