Microbial rhodopsins: diversity, mechanisms, and optogenetic applications

EG Govorunova, OA Sineshchekov, H Li… - Annual review of …, 2017 - annualreviews.org
Microbial rhodopsins are a family of photoactive retinylidene proteins widespread
throughout the microbial world. They are notable for their diversity of function, using …

Rhodopsins at a glance

T Nagata, K Inoue - Journal of Cell Science, 2021 - journals.biologists.com
Rhodopsins are photoreceptive membrane proteins consisting of a common heptahelical
transmembrane architecture that contains a retinal chromophore. Rhodopsin was first …

Femtosecond-to-millisecond structural changes in a light-driven sodium pump

P Skopintsev, D Ehrenberg, T Weinert, D James… - Nature, 2020 - nature.com
Light-driven sodium pumps actively transport small cations across cellular membranes.
These pumps are used by microorganisms to convert light into membrane potential and …

Crystal structure of a light-driven sodium pump

I Gushchin, V Shevchenko, V Polovinkin… - Nature structural & …, 2015 - nature.com
Recently, the first known light-driven sodium pumps, from the microbial rhodopsin family,
were discovered. We have solved the structure of one of them, Krokinobacter eikastus …

Molecular mechanism of light-driven sodium pum**

K Kovalev, R Astashkin, I Gushchin, P Orekhov… - Nature …, 2020 - nature.com
The light-driven sodium-pum** rhodopsin KR2 from Krokinobacter eikastus is the only
non-proton cation active transporter with demonstrated potential for optogenetics. However …

Soil organic matter and salinity as critical factors affecting the bacterial community and function of Phragmites australis dominated riparian and coastal wetlands

Z Chi, W Wang, H Li, H Wu, B Yan - Science of the Total Environment, 2021 - Elsevier
Soil salinization poses a great threat to the natural ecosystem and interferes with the
structure and function of the biological community, resulting in different vegetation …

Ion-pum** microbial rhodopsins

H Kandori - Frontiers in molecular biosciences, 2015 - frontiersin.org
Rhodopsins are light-sensing proteins used in optogenetics. The word “rhodopsin”
originates from the Greek words “rhodo” and “opsis,” indicating rose and sight, respectively …

Light-driven sodium-pum** rhodopsin: a new concept of active transport

H Kandori, K Inoue, SP Tsunoda - Chemical reviews, 2018 - ACS Publications
Ion pumps perform active transport of ions by using energy. The active transport mechanism
can be illustrated by the Panama Canal model, which considers two gates and a gain in …

Light-driven chloride and sulfate pump with two different transport modes

M Singh, S Ito, S Hososhima… - The Journal of …, 2023 - ACS Publications
Ion pumps are membrane proteins that actively translocate ions by using energy. All known
pumps bind ions in the resting state, and external energy allows ion transport through …

Retinal proteins: photochemistry and optogenetics

H Kandori - Bulletin of the Chemical Society of Japan, 2020 - academic.oup.com
Rhodopsins, which are also called retinal proteins, are photoreceptive proteins. Their
photoreactions have attracted many researchers in physics, chemistry and biology. In …