Genomics for monitoring and understanding species responses to global climate change

L Bernatchez, AL Ferchaud, CS Berger… - Nature Reviews …, 2024 - nature.com
All life forms across the globe are experiencing drastic changes in environmental conditions
as a result of global climate change. These environmental changes are happening rapidly …

Trait‐based approaches as ecological time machines: Develo** tools for reconstructing long‐term variation in ecosystems

KA Brown, MJ Bunting, F Carvalho… - Functional …, 2023 - Wiley Online Library
Research over the past decade has shown that quantifying spatial variation in ecosystem
properties is an effective approach to investigating the effects of environmental change on …

How close are we to storing data in DNA?

JHDB Gervasio, H da Costa Oliveira… - Trends in …, 2024 - cell.com
DNA is an intelligent data storage medium due to its stability and high density. It has been
used by nature for over 3.5 billion years. Compared with traditional methods, DNA offers …

Environmental DNA of aquatic macrophytes: The potential for reconstructing past and present vegetation and environments

A Revéret, DP Rijal, PD Heintzman… - Freshwater …, 2023 - Wiley Online Library
Environmental DNA is increasingly being used to reconstruct past and present biodiversity
including from freshwater ecosystems. Macrophytes are especially good environmental …

Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample

M Sandoval-Velasco, O Dudchenko, JA Rodríguez… - Cell, 2024 - cell.com
Analyses of ancient DNA typically involve sequencing the surviving short oligonucleotides
and aligning to genome assemblies from related, modern species. Here, we report that skin …

Detection of fish sedimentary DNA in aquatic systems: A review of methodological challenges and future opportunities

GP Huston, MLD Lopez, Y Cheng, L King… - Environmental …, 2023 - Wiley Online Library
Environmental DNA studies have proliferated over the last decade, with promising data
describing the diversity of organisms inhabiting aquatic and terrestrial ecosystems. The …

Genetic gains underpinning a little-known strawberry Green Revolution

MJ Feldmann, DDA Pincot, GS Cole… - Nature …, 2024 - nature.com
The annual production of strawberry has increased by one million tonnes in the US and 8.4
million tonnes worldwide since 1960. Here we show that the US expansion was driven by …

Environmental DNA as an emerging tool in botanical research

MD Johnson, JR Freeland, L Parducci… - American journal of …, 2023 - Wiley Online Library
Over the past quarter century, environmental DNA (eDNA) has been ascendant as a tool to
detect, measure, and monitor biodiversity (species and communities), as a means of …

Historical RNA expression profiles from the extinct Tasmanian tiger

E Mármol-Sánchez, B Fromm, N Oskolkov… - Genome …, 2023 - genome.cshlp.org
Paleogenomics continues to yield valuable insights into the evolution, population dynamics,
and ecology of our ancestors and other extinct species. However, DNA sequencing cannot …

Deep-time paleogenomics and the limits of DNA survival

L Dalén, PD Heintzman, JD Kapp, B Shapiro - Science, 2023 - science.org
Although most ancient DNA studies have focused on the last 50,000 years, paleogenomic
approaches can now reach into the early Pleistocene, an epoch of repeated environmental …