Genomics for monitoring and understanding species responses to global climate change

L Bernatchez, AL Ferchaud, CS Berger… - Nature Reviews …, 2024 - nature.com
All life forms across the globe are experiencing drastic changes in environmental conditions
as a result of global climate change. These environmental changes are happening rapidly …

[HTML][HTML] Artificial intelligence in paleontology

C Yu, F Qin, A Watanabe, W Yao, Y Li, Z Qin, Y Liu… - Earth-Science …, 2024 - Elsevier
The accumulation of large datasets and increasing data availability have led to the
emergence of data-driven paleontological studies, which reveal an unprecedented picture of …

Genetic gains underpinning a little-known strawberry green revolution

MJ Feldmann, DDA Pincot, GS Cole… - Nature …, 2024 - nature.com
The annual production of strawberry has increased by one million tonnes in the US and 8.4
million tonnes worldwide since 1960. Here we show that the US expansion was driven by …

CRISPR-powered quantitative keyword search engine in DNA data storage

J Zhang, C Hou, C Liu - Nature Communications, 2024 - nature.com
Despite the growing interest of archiving information in synthetic DNA to confront data
explosion, quantitatively querying the data stored in DNA is still a challenge. Herein, we …

Sediment DNA can revolutionize archaeology—if it is used the right way

V Aldeias, MC Stahlschmidt - Proceedings of the National Academy of …, 2024 - pnas.org
The possibility of fingerprinting ancient organisms using the DNA they leave behind is a
revolution in our understanding of the past. Paleogenetic studies are rewriting our …

Deep-time paleogenomics and the limits of DNA survival

L Dalén, PD Heintzman, JD Kapp, B Shapiro - Science, 2023 - science.org
Although most ancient DNA studies have focused on the last 50,000 years, paleogenomic
approaches can now reach into the early Pleistocene, an epoch of repeated environmental …

Navigating past oceans: comparing metabarcoding and metagenomics of marine ancient sediment environmental DNA

LE Holman, G Zampirolo, R Gyllencreutz… - Molecular Ecology …, 2025 - Wiley Online Library
The condition of ancient marine ecosystems provides context for contemporary biodiversity
changes in human‐impacted oceans. Sequencing sedimentary ancient DNA (sedaDNA) is …

Importance of eDNA taphonomy and sediment provenance for robust ecological inference: Insights from interfacial geochemistry

KK Sand, S Jelavić, KH Kjær, A Prohaska - Environmental DNA, 2024 - Wiley Online Library
Retrieval of modern and ancient environmental DNA (eDNA) from sediments has
revolutionized our ability to study past and present ecosystems. Little emphasis has been …

How close are we to storing data in DNA?

JHDB Gervasio, H da Costa Oliveira… - Trends in …, 2024 - cell.com
DNA is an intelligent data storage medium due to its stability and high density. It has been
used by nature for over 3.5 billion years. Compared with traditional methods, DNA offers …

Historical RNA expression profiles from the extinct Tasmanian tiger

E Mármol-Sánchez, B Fromm, N Oskolkov… - Genome …, 2023 - genome.cshlp.org
Paleogenomics continues to yield valuable insights into the evolution, population dynamics,
and ecology of our ancestors and other extinct species. However, DNA sequencing cannot …