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Big data in basic and translational cancer research
Historically, the primary focus of cancer research has been molecular and clinical studies of
a few essential pathways and genes. Recent years have seen the rapid accumulation of …
a few essential pathways and genes. Recent years have seen the rapid accumulation of …
A landscape of response to drug combinations in non-small cell lung cancer
Combination of anti-cancer drugs is broadly seen as way to overcome the often-limited
efficacy of single agents. The design and testing of combinations are however very …
efficacy of single agents. The design and testing of combinations are however very …
Synthetic lethality-mediated precision oncology via the tumor transcriptome
Precision oncology has made significant advances, mainly by targeting actionable mutations
in cancer driver genes. Aiming to expand treatment opportunities, recent studies have begun …
in cancer driver genes. Aiming to expand treatment opportunities, recent studies have begun …
MAPK-pathway inhibition mediates inflammatory reprogramming and sensitizes tumors to targeted activation of innate immunity sensor RIG-I
J Brägelmann, C Lorenz, S Borchmann, K Nishii… - Nature …, 2021 - nature.com
Kinase inhibitors suppress the growth of oncogene driven cancer but also enforce the
selection of treatment resistant cells that are thought to promote tumor relapse in patients …
selection of treatment resistant cells that are thought to promote tumor relapse in patients …
Translational reprogramming marks adaptation to asparagine restriction in cancer
G Pathria, JS Lee, E Hasnis, K Tandoc, DA Scott… - Nature cell …, 2019 - nature.com
While amino acid restriction remains an attractive strategy for cancer therapy, metabolic
adaptations limit its effectiveness. Here we demonstrate a role of translational …
adaptations limit its effectiveness. Here we demonstrate a role of translational …
[HTML][HTML] Potential biomarkers of skin melanoma resistance to targeted therapy—present state and perspectives
M Olbryt - Cancers, 2022 - mdpi.com
Simple Summary Around 5–10% of advanced melanoma patients progress early on anti-
BRAF targeted therapy and 20–30% respond only with the stabilization of the disease …
BRAF targeted therapy and 20–30% respond only with the stabilization of the disease …
Clinically oriented prediction of patient response to targeted and immunotherapies from the tumor transcriptome
G Dinstag, ED Shulman, E Elis, DS Ben-Zvi, O Tirosh… - Med, 2023 - cell.com
Background Precision oncology is gradually advancing into mainstream clinical practice,
demonstrating significant survival benefits. However, eligibility and response rates remain …
demonstrating significant survival benefits. However, eligibility and response rates remain …
[HTML][HTML] Genomic and transcriptomic analyses identify a prognostic gene signature and predict response to therapy in pleural and peritoneal mesothelioma
Malignant mesothelioma is an aggressive cancer with limited treatment options and poor
prognosis. A better understanding of mesothelioma genomics and transcriptomics could …
prognosis. A better understanding of mesothelioma genomics and transcriptomics could …
A systematic analysis of the landscape of synthetic lethality-driven precision oncology
Background Synthetic lethality (SL) denotes a genetic interaction between two genes whose
co-inactivation is detrimental to cells. Because more than 25 years have passed since SL …
co-inactivation is detrimental to cells. Because more than 25 years have passed since SL …
CTR-DB 2.0: an updated cancer clinical transcriptome resource, expanding primary drug resistance and newly adding acquired resistance datasets and enhancing …
J Jiang, Y Ma, L Yang, S Ma, Z Yu, X Ren… - Nucleic Acids …, 2025 - academic.oup.com
Drug resistance is a principal limiting factor in cancer treatment. CTR-DB, the Cancer
Treatment Response gene signature DataBase, is the first data resource for clinical …
Treatment Response gene signature DataBase, is the first data resource for clinical …