Graph-based deep learning for medical diagnosis and analysis: past, present and future

D Ahmedt-Aristizabal, MA Armin, S Denman, C Fookes… - Sensors, 2021 - mdpi.com
With the advances of data-driven machine learning research, a wide variety of prediction
problems have been tackled. It has become critical to explore how machine learning and …

[HTML][HTML] Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization

F Hu, AA Chen, H Horng, V Bashyam, C Davatzikos… - NeuroImage, 2023 - Elsevier
Magnetic resonance imaging and computed tomography from multiple batches (eg sites,
scanners, datasets, etc.) are increasingly used alongside complex downstream analyses to …

[HTML][HTML] NODDI in clinical research

K Kamiya, M Hori, S Aoki - Journal of neuroscience methods, 2020 - Elsevier
Diffusion MRI (dMRI) has proven to be a useful imaging approach for both clinical diagnosis
and research investigating the microstructures of nervous tissues, and it has helped us to …

Making radiomics more reproducible across scanner and imaging protocol variations: a review of harmonization methods

SA Mali, A Ibrahim, HC Woodruff… - Journal of personalized …, 2021 - mdpi.com
Radiomics converts medical images into mineable data via a high-throughput extraction of
quantitative features used for clinical decision support. However, these radiomic features are …

[HTML][HTML] What's new and what's next in diffusion MRI preprocessing

CMW Tax, M Bastiani, J Veraart, E Garyfallidis… - NeuroImage, 2022 - Elsevier
Diffusion MRI (dMRI) provides invaluable information for the study of tissue microstructure
and brain connectivity, but suffers from a range of imaging artifacts that greatly challenge the …

[HTML][HTML] Data harmonisation for information fusion in digital healthcare: A state-of-the-art systematic review, meta-analysis and future research directions

Y Nan, J Del Ser, S Walsh, C Schönlieb, M Roberts… - Information …, 2022 - Elsevier
Removing the bias and variance of multicentre data has always been a challenge in large
scale digital healthcare studies, which requires the ability to integrate clinical features …

[HTML][HTML] Challenges for biophysical modeling of microstructure

IO Jelescu, M Palombo, F Bagnato… - Journal of Neuroscience …, 2020 - Elsevier
The biophysical modeling efforts in diffusion MRI have grown considerably over the past 25
years. In this review, we dwell on the various challenges along the journey of bringing a …

[HTML][HTML] Uncertainty modelling in deep learning for safer neuroimage enhancement: Demonstration in diffusion MRI

R Tanno, DE Worrall, E Kaden, A Ghosh, F Grussu… - NeuroImage, 2021 - Elsevier
Deep learning (DL) has shown great potential in medical image enhancement problems,
such as super-resolution or image synthesis. However, to date, most existing approaches …

Site effects how-to and when: An overview of retrospective techniques to accommodate site effects in multi-site neuroimaging analyses

JMM Bayer, PM Thompson, CRK Ching, M Liu… - Frontiers in …, 2022 - frontiersin.org
Site differences, or systematic differences in feature distributions across multiple data-
acquisition sites, are a known source of heterogeneity that may adversely affect large-scale …

Harmonization of brain diffusion MRI: concepts and methods

MS Pinto, R Paolella, T Billiet, P Van Dyck… - Frontiers in …, 2020 - frontiersin.org
MRI diffusion data suffers from significant inter-and intra-site variability, which hinders multi-
site and/or longitudinal diffusion studies. This variability may arise from a range of factors …