Global phenotypic characterization of bacteria

BR Bochner - FEMS microbiology reviews, 2008 - academic.oup.com
The measure of the quality of a systems biology model is how well it can reproduce and
predict the behaviors of a biological system such as a microbial cell. In recent years, these …

MexXY multidrug efflux system of Pseudomonas aeruginosa

Y Morita, J Tomida, Y Kawamura - Frontiers in microbiology, 2012 - frontiersin.org
Anti-pseudomonas aminoglycosides, such as amikacin and tobramycin, are used in the
treatment of Pseudomonas aeruginosa infections. However, their use is linked to the …

Evidence for biological denitrification inhibition (BDI) by plant secondary metabolites

C Bardon, F Piola, F Bellvert, FZ Haichar… - New …, 2014 - Wiley Online Library
Previous studies on the effect of secondary metabolites on the functioning of rhizosphere
microbial communities have often focused on aspects of the nitrogen (N) cycle but have …

Mechanistically compatible mixtures of bacterial antagonists improve biological control of fire blight of pear

VO Stockwell, KB Johnson, D Sugar… - Phytopathology, 2011 - Am Phytopath Society
Mixtures of biological control agents can be superior to individual agents in suppressing
plant disease, providing enhanced efficacy and reliability from field to field relative to single …

Control of Fire Blight by Pseudomonas fluorescens A506 and Pantoea vagans C9-1 Applied as Single Strains and Mixed Inocula

VO Stockwell, KB Johnson, D Sugar… - Phytopathology, 2010 - Am Phytopath Society
The biological control agents Pseudomonas fluorescens A506 and Pantoea vagans C9-1
were evaluated individually and in combination for the suppression of fire blight of pear or …

Three-dimensional label-free observation of individual bacteria upon antibiotic treatment using optical diffraction tomography

J Oh, JS Ryu, M Lee, J Jung, SY Han… - Biomedical optics …, 2020 - opg.optica.org
Measuring alterations in bacteria upon antibiotic application is important for basic studies in
microbiology, drug discovery, clinical diagnosis, and disease treatment. However, imaging …

Deciphering the Role of RND Efflux Transporters in Burkholderia cenocepacia

S Bazzini, C Udine, A Sass, MR Pasca, F Longo… - PLoS …, 2011 - journals.plos.org
Burkholderia cenocepacia J2315 is representative of a highly problematic group of cystic
fibrosis (CF) pathogens. Eradication of B. cenocepacia is very difficult with the antimicrobial …

Assay of the multiple energy-producing pathways of mammalian cells

BR Bochner, M Siri, RH Huang, S Noble, XH Lei… - PloS one, 2011 - journals.plos.org
Background To elucidate metabolic changes that occur in diabetes, obesity, and cancer, it is
important to understand cellular energy metabolism pathways and their alterations in …

Experimental conditions affect the site of tetrazolium violet reduction in the electron transport chain of Lactococcus lactis

S Tachon, D Michelon, E Chambellon… - …, 2009 - microbiologyresearch.org
The reduction of tetrazolium salts to coloured formazans is often used as an indicator of cell
metabolism during microbiology studies, although the reduction mechanisms have never …

Industrial bioprocess control and optimization in the context of systems biotechnology

Y Wang, J Chu, Y Zhuang, Y Wang, J **a… - Biotechnology advances, 2009 - Elsevier
The developments of the systems biotechnology and its application in the industrial process
open up new horizons to industrial biotechnology. The unprecedented understanding of the …