Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow

M Ravinet, R Faria, RK Butlin, J Galindo… - Journal of …, 2017 - academic.oup.com
Speciation, the evolution of reproductive isolation among populations, is continuous,
complex, and involves multiple, interacting barriers. Until it is complete, the effects of this …

A practical guide to environmental association analysis in landscape genomics

C Rellstab, F Gugerli, AJ Eckert, AM Hancock… - Molecular …, 2015 - Wiley Online Library
Landscape genomics is an emerging research field that aims to identify the environmental
factors that shape adaptive genetic variation and the gene variants that drive local …

Stacks: an analysis tool set for population genomics

J Catchen, PA Hohenlohe, S Bassham… - Molecular …, 2013 - Wiley Online Library
Massively parallel short‐read sequencing technologies, coupled with powerful software
platforms, are enabling investigators to analyse tens of thousands of genetic markers. This …

Hybridization, introgression, and the nature of species boundaries

RG Harrison, EL Larson - Journal of Heredity, 2014 - academic.oup.com
Species can be defined as populations that are diagnosably distinct, reproductively isolated,
cohesive, or exclusive groups of organisms. Boundaries between species in sympatry are …

Genomics and the origin of species

O Seehausen, RK Butlin, I Keller, CE Wagner… - Nature Reviews …, 2014 - nature.com
Speciation is a fundamental evolutionary process, the knowledge of which is crucial for
understanding the origins of biodiversity. Genomic approaches are an increasingly …

Genome-wide evidence for speciation with gene flow in Heliconius butterflies

SH Martin, KK Dasmahapatra, NJ Nadeau… - Genome …, 2013 - genome.cshlp.org
Most speciation events probably occur gradually, without complete and immediate
reproductive isolation, but the full extent of gene flow between diverging species has rarely …

Stick insect genomes reveal natural selection's role in parallel speciation

V Soria-Carrasco, Z Gompert, AA Comeault, TE Farkas… - Science, 2014 - science.org
Natural selection can drive the repeated evolution of reproductive isolation, but the genomic
basis of parallel speciation remains poorly understood. We analyzed whole-genome …

Widespread evidence for incipient ecological speciation: a meta‐analysis of isolation‐by‐ecology

ABA Shafer, JBW Wolf - Ecology letters, 2013 - Wiley Online Library
Ecologically mediated selection has increasingly become recognised as an important driver
of speciation. The correlation between neutral genetic differentiation and environmental or …

Biological invasions, climate change, and genomics

SL Chown, KA Hodgins, PC Griffin - Crop Breeding, 2016 - taylorfrancis.com
Biological invasions constitute a major environmental change driver, affecting conservation,
agriculture and human health. Invasive alien species (IAS) impacts include, alterations of …

Complex evolutionary processes maintain an ancient chromosomal inversion

P Nosil, V Soria-Carrasco… - Proceedings of the …, 2023 - National Acad Sciences
Genome re-arrangements such as chromosomal inversions are often involved in adaptation.
As such, they experience natural selection, which can erode genetic variation. Thus …