[HTML][HTML] The potyviruses: an evolutionary synthesis is emerging

AJ Gibbs, M Hajizadeh, K Ohshima, RAC Jones - Viruses, 2020 - mdpi.com
In this review, encouraged by the dictum of Theodosius Dobzhansky that “Nothing in biology
makes sense except in the light of evolution”, we outline the likely evolutionary pathways …

Plant viruses and viroids in Japan

S Fuji, T Mochizuki, M Okuda, S Tsuda… - Journal of General Plant …, 2022 - Springer
An increasing number of plant viruses and viroids have been reported from all over the
world due largely to metavirogenomics approaches with technological innovation. Herein …

Synonymous codon usage analysis of three narcissus potyviruses

Z He, S Ding, J Guo, L Qin, X Xu - Viruses, 2022 - mdpi.com
Narcissus degeneration virus (NDV), narcissus late season yellows virus (NLSYV) and
narcissus yellow stripe virus (NYSV), which belong to the genus Potyvirus of the family …

Population genetic dynamics of southern tomato virus from Turkey

F Randa-Zelyüt, A Fox, A Karanfil - Journal of Plant Pathology, 2023 - Springer
Southern tomato virus (STV) has been reported from many countries. However, the infection
status and population structure of STV in Turkey are unknown. In this study, the presence of …

Time-Sampled Population Sequencing Reveals the Interplay of Selection and Genetic Drift in Experimental Evolution of Potato Virus Y

D Kutnjak, SF Elena, M Ravnikar - Journal of Virology, 2017 - journals.asm.org
ABSTRACT RNA viruses are one of the fastest-evolving biological entities. Within their
hosts, they exist as genetically diverse populations (ie, viral mutant swarms), which are …

Genetic diversity and evolutionary analyses of potyviruses infecting narcissus in Iran

H Valouzi, N Shahmohammadi, A Golnaraghi… - Journal of Plant …, 2022 - Springer
Potyviruses are among the most important pathogens of dicotyledonous and
monocotyledonous ornamentals and crop plants. In this study, leaf samples were collected …

The first complete genome sequence of narcissus latent virus from Narcissus

F Gao, J Shen, F Liao, W Cai, S Lin, H Yang, S Chen - Archives of virology, 2018 - Springer
The complete sequence of a narcissus virus isolated from the Netherlands (Narv-NL) was
determined to be 8172 nucleotides in length with an open reading frame encoding for 2624 …

Population structure and genetic diversity of tobacco mild green mosaic virus variants in Western Anatolia of Turkey

A Karanfil, F Randa-Zelyüt, S Korkmaz - Physiological and Molecular Plant …, 2023 - Elsevier
Tobamoviruses have been pioneers in understanding the population genetic structure, host-
vector interactions, and evolutionary processes of viruses. To better understand the …

[HTML][HTML] In Silico Virome Analysis of Chinese Narcissus Transcriptomes Reveals Diverse Virus Species and Genetic Diversity at Different Flower Development Stages

H Choi, Y Jo, WK Cho - Biology, 2023 - mdpi.com
Simple Summary In this study, we analyzed Chinese narcissus flowers at different stages of
development to determine the presence of viruses. We identified seven viral species …

The genetic diversity of narcissus viruses related to turnip mosaic virus blur arbitrary boundaries used to discriminate potyvirus species

K Ohshima, S Mitoma, AJ Gibbs - PLoS One, 2018 - journals.plos.org
Narcissus plants (Narcissus tazetta var. chinensis) showing mosaic or stri** leaves were
collected from around Japan, and tested for virus infections using potyvirus-specific primers …