A physio-morphological trait-based approach for breeding drought tolerant wheat

K Khadka, HJ Earl, MN Raizada, A Navabi - Frontiers in plant science, 2020 - frontiersin.org
In the past, there have been drought events in different parts of the world, which have
negatively influenced the productivity and production of various crops including wheat …

Machine learning versus crop growth models: an ally, not a rival

N Zhang, X Zhou, M Kang, BG Hu, E Heuvelink… - AoB Plants, 2023 - academic.oup.com
The rapid increases of the global population and climate change pose major challenges to a
sustainable production of food to meet consumer demands. Process-based models (PBMs) …

The use of plant models in deep learning: an application to leaf counting in rosette plants

J Ubbens, M Cieslak, P Prusinkiewicz, I Stavness - Plant methods, 2018 - Springer
Deep learning presents many opportunities for image-based plant phenoty**. Here we
consider the capability of deep convolutional neural networks to perform the leaf counting …

The sponge microbiome project

L Moitinho-Silva, S Nielsen, A Amir, A Gonzalez… - …, 2017 - academic.oup.com
Rhododendron delavayi Franch. is globally famous as an ornamental plant. Its distribution in
southwest China covers several different habitats and environments. However, not much …

Computer vision and machine learning enabled soybean root phenoty** pipeline

KG Falk, TZ Jubery, SV Mirnezami, KA Parmley… - Plant methods, 2020 - Springer
Background Root system architecture (RSA) traits are of interest for breeding selection;
however, measurement of these traits is difficult, resource intensive, and results in large …

[HTML][HTML] RhizoVision crown: an integrated hardware and software platform for root crown phenoty**

A Seethepalli, H Guo, X Liu, M Griffiths, H Almtarfi… - Plant …, 2020 - spj.science.org
Root crown phenoty** measures the top portion of crop root systems and can be used for
marker-assisted breeding, genetic map**, and understanding how roots influence soil …

Image analysis in plant sciences: publish then perish

G Lobet - Trends in plant science, 2017 - cell.com
Image analysis has become a powerful technique for most plant scientists. In recent years
dozens of image analysis tools have been published in plant science journals. These tools …

Resources for image-based high-throughput phenoty** in crops and data sharing challenges

MF Danilevicz, PE Bayer, BJ Nestor… - Plant …, 2021 - academic.oup.com
High-throughput phenoty** (HTP) platforms are capable of monitoring the phenotypic
variation of plants through multiple types of sensors, such as red green and blue (RGB) …

Transfer learning from synthetic data applied to soil–root segmentation in x-ray tomography images

C Douarre, R Schielein, C Frindel, S Gerth… - Journal of …, 2018 - mdpi.com
One of the most challenging computer vision problems in the plant sciences is the
segmentation of roots and soil in X-ray tomography. So far, this has been addressed using …

Multiscale computational models can guide experimentation and targeted measurements for crop improvement

B Benes, K Guan, M Lang, SP Long, JP Lynch… - The Plant …, 2020 - Wiley Online Library
Computational models of plants have identified gaps in our understanding of biological
systems, and have revealed ways to optimize cellular processes or organ‐level architecture …