The divided bacterial genome: structure, function, and evolution

GC Dicenzo, TM Finan - Microbiology and Molecular Biology …, 2017 - Am Soc Microbiol
Approximately 10% of bacterial genomes are split between two or more large DNA
fragments, a genome architecture referred to as a multipartite genome. This multipartite …

Utilization of legume-nodule bacterial symbiosis in phytoremediation of heavy metal-contaminated soils

ME Jach, E Sajnaga, M Ziaja - Biology, 2022 - mdpi.com
Simple Summary The legume–rhizobium symbiosis is one of the most beneficial interactions
with high importance in agriculture, as it delivers nitrogen to plants and soil, thereby …

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

R Caspi, T Altman, K Dreher, CA Fulcher… - Nucleic acids …, 2012 - academic.oup.com
Abstract The MetaCyc database (http://metacyc. org/) provides a comprehensive and freely
accessible resource for metabolic pathways and enzymes from all domains of life. The …

Harnessing rhizobia to improve heavy-metal phytoremediation by legumes

C Fagorzi, A Checcucci, GC DiCenzo… - Genes, 2018 - mdpi.com
Rhizobia are bacteria that can form symbiotic associations with plants of the Fabaceae
family, during which they reduce atmospheric di-nitrogen to ammonia. The symbiosis …

Multidisciplinary approaches for studying rhizobium–legume symbioses

GC Dicenzo, M Zamani, A Checcucci… - Canadian Journal of …, 2019 - cdnsciencepub.com
The rhizobium–legume symbiosis is a major source of fixed nitrogen (ammonia) in the
biosphere. The potential for this process to increase agricultural yield while reducing the …

Metabolic modelling reveals the specialization of secondary replicons for niche adaptation in Sinorhizobium meliloti

GC Dicenzo, A Checcucci, M Bazzicalupo… - Nature …, 2016 - nature.com
The genome of about 10% of bacterial species is divided among two or more large
chromosome-sized replicons. The contribution of each replicon to the microbial life cycle (for …

Regulation of conjugative transfer of plasmids and integrative conjugative elements

LA Bañuelos-Vazquez, GT Tejerizo, S Brom - Plasmid, 2017 - Elsevier
Horizontal gene transfer has been recognized as one of the principal contributors to
bacterial evolution and diversification. One of the mechanisms involved in this process is …

Examination of prokaryotic multipartite genome evolution through experimental genome reduction

GC diCenzo, AM MacLean, B Milunovic… - PLoS …, 2014 - journals.plos.org
Many bacteria carry two or more chromosome-like replicons. This occurs in pathogens such
as Vibrio cholerea and Brucella abortis as well as in many N2-fixing plant symbionts …

The genetics of symbiotic nitrogen fixation: comparative genomics of 14 rhizobia strains by resolution of protein clusters

M Black, P Moolhuijzen, B Chapman, R Barrero… - Genes, 2012 - mdpi.com
The symbiotic relationship between legumes and nitrogen fixing bacteria is critical for
agriculture, as it may have profound impacts on lowering costs for farmers, on land …

[HTML][HTML] Rhizobial extrachromosomal replicon variability, stability and expression in natural niches

MG López-Guerrero, E Ormeño-Orrillo, JL Acosta… - Plasmid, 2012 - Elsevier
In bacteria, niche adaptation may be determined by mobile extrachromosomal elements. A
remarkable characteristic of Rhizobium and Ensifer (Sinorhizobium) but also of …