[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods

J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …

[HTML][HTML] Sedimentary ancient DNA reveals past ecosystem and biodiversity changes on the Tibetan Plateau: Overview and prospects

W Jia, S Anslan, F Chen, X Cao, H Dong… - Quaternary Science …, 2022 - Elsevier
Alpine ecosystems on the Tibetan Plateau are being threatened by ongoing climate
warming and intensified human activities. Ecological time-series obtained from sedimentary …

Late Quaternary dynamics of Arctic biota from ancient environmental genomics

Y Wang, MW Pedersen, IG Alsos, B De Sanctis… - Nature, 2021 - nature.com
During the last glacial–interglacial cycle, Arctic biotas experienced substantial climatic
changes, yet the nature, extent and rate of their responses are not fully understood …

Postglacial species arrival and diversity buildup of northern ecosystems took millennia

IG Alsos, DP Rijal, D Ehrich, DN Karger, NG Yoccoz… - Science …, 2022 - science.org
What drives ecosystem buildup, diversity, and stability? We assess species arrival and
ecosystem changes across 16 millennia by combining regional-scale plant sedimentary …

Sediment DNA can revolutionize archaeology—if it is used the right way

V Aldeias, MC Stahlschmidt - Proceedings of the National Academy of …, 2024 - pnas.org
The possibility of fingerprinting ancient organisms using the DNA they leave behind is a
revolution in our understanding of the past. Paleogenetic studies are rewriting our …

Transient social–ecological dynamics reveal signals of decoupling in a highly disturbed Anthropocene landscape

Q Lin, K Zhang, C Giguet-Covex, F Arnaud… - Proceedings of the …, 2024 - pnas.org
Understanding the transient dynamics of interlinked social–ecological systems (SES) is
imperative for assessing sustainability in the Anthropocene. However, how to identify critical …

Plant biodiversity assessment through soil eDNA reflects temporal and local diversity

M Ariza, B Fouks, Q Mauvisseau… - Methods in Ecology …, 2023 - Wiley Online Library
Several studies have shown the potential of eDNA‐based proxies for plant identification, but
little is known about their spatial and temporal resolution. This limits its use for plant …

Potential plant extinctions with the loss of the Pleistocene mammoth steppe

J Courtin, KR Stoof-Leichsenring, S Lisovski… - Nature …, 2025 - nature.com
Abstract During the Pleistocene-Holocene transition, the dominant mammoth steppe
ecosystem across northern Eurasia vanished, in parallel with megafauna extinctions …

Navigating past oceans: comparing metabarcoding and metagenomics of marine ancient sediment environmental DNA

LE Holman, G Zampirolo, R Gyllencreutz… - Molecular Ecology …, 2025 - Wiley Online Library
The condition of ancient marine ecosystems provides context for contemporary biodiversity
changes in human‐impacted oceans. Sequencing sedimentary ancient DNA (sedaDNA) is …

Importance of eDNA taphonomy and sediment provenance for robust ecological inference: Insights from interfacial geochemistry

KK Sand, S Jelavić, KH Kjær, A Prohaska - Environmental DNA, 2024 - Wiley Online Library
Retrieval of modern and ancient environmental DNA (eDNA) from sediments has
revolutionized our ability to study past and present ecosystems. Little emphasis has been …