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Multiscale simulation of DNA
Highlights•We describe the most recent methods to study DNA from electrons to
chromosomes.•Methods were classified as: electronic, atomistic, coarse grained, and …
chromosomes.•Methods were classified as: electronic, atomistic, coarse grained, and …
Endogenous polyamine function—the RNA perspective
HL Lightfoot, J Hall - Nucleic acids research, 2014 - academic.oup.com
Recent progress with techniques for monitoring RNA structure in cells such as 'DMS-
Seq'and 'Structure-Seq'suggests that a new era of RNA structure-function exploration is on …
Seq'and 'Structure-Seq'suggests that a new era of RNA structure-function exploration is on …
Computational chemistry and molecular modelling basics
The use of computers for predicting the structures and properties of biomolecules has
closely paralleled computer development since the 1950s, and has been one of the core …
closely paralleled computer development since the 1950s, and has been one of the core …
Exploiting hydrogen bonding interactions to probe smaller linear and cyclic diamines binding to G-quadruplexes: a DFT and molecular dynamics study
G-quadruplexes are formed by the association of four guanine bases through Hoogsteen
hydrogen bonding in guanine-rich sequences of DNA and exist in the telomere as well as in …
hydrogen bonding in guanine-rich sequences of DNA and exist in the telomere as well as in …
Lithographic patterning of polymeric media for biotechnology applications
RP Deschner - 2013 - repositories.lib.utexas.edu
Lithographic patterning has heavily utilized in the semiconductor industry for its ability to
pattern vast numbers of complex shapes down to the nanometer scale. However, only …
pattern vast numbers of complex shapes down to the nanometer scale. However, only …