Prevalence and adaptive impact of introgression

NB Edelman, J Mallet - Annual review of genetics, 2021 - annualreviews.org
Alleles that introgress between species can influence the evolutionary and ecological fate of
species exposed to novel environments. Hybrid offspring of different species are often unfit …

Insights from genomes into the evolutionary importance and prevalence of hybridization in nature

SA Taylor, EL Larson - Nature ecology & evolution, 2019 - nature.com
Hybridization is an evolutionary phenomenon that has fascinated biologists for centuries.
Prior to the advent of whole-genome sequencing, it was clear that hybridization had played …

Comparative genomics reveals the dynamics of chromosome evolution in Lepidoptera

CJ Wright, L Stevens, A Mackintosh… - Nature ecology & …, 2024 - nature.com
Chromosomes are a central unit of genome organization. One-tenth of all described species
on Earth are butterflies and moths, the Lepidoptera, which generally possess 31 …

Hybrid speciation driven by multilocus introgression of ecological traits

N Rosser, F Seixas, LM Queste, B Cama, R Mori-Pezo… - Nature, 2024 - nature.com
Hybridization allows adaptations to be shared among lineages and may trigger the evolution
of new species,. However, convincing examples of homoploid hybrid speciation remain rare …

Dsuite ‐ Fast D‐statistics and related admixture evidence from VCF files

M Malinsky, M Matschiner… - Molecular ecology …, 2021 - Wiley Online Library
Patterson's D, also known as the ABBA‐BABA statistic, and related statistics such as the f4‐
ratio, are commonly used to assess evidence of gene flow between populations or closely …

The role of hybridization in species formation and persistence

JV Peñalba, A Runemark, JI Meier… - Cold Spring …, 2024 - cshperspectives.cshlp.org
Hybridization, or interbreeding between different taxa, was traditionally considered to be
rare and to have a largely detrimental impact on biodiversity, sometimes leading to the …

[HTML][HTML] BlastKOALA and GhostKOALA: KEGG tools for functional characterization of genome and metagenome sequences

M Kanehisa, Y Sato, K Morishima - Journal of molecular biology, 2016 - Elsevier
BlastKOALA and GhostKOALA are automatic annotation servers for genome and
metagenome sequences, which perform KO (KEGG Orthology) assignments to characterize …

Widespread introgression across a phylogeny of 155 Drosophila genomes

A Suvorov, BY Kim, J Wang, EE Armstrong, D Peede… - Current Biology, 2022 - cell.com
Genome-scale sequence data have invigorated the study of hybridization and introgression,
particularly in animals. However, outside of a few notable cases, we lack systematic tests for …

Genomic architecture and introgression shape a butterfly radiation

NB Edelman, PB Frandsen, M Miyagi, B Clavijo… - Science, 2019 - science.org
We used 20 de novo genome assemblies to probe the speciation history and architecture of
gene flow in rapidly radiating Heliconius butterflies. Our tests to distinguish incomplete …

Ancient hybridization fuels rapid cichlid fish adaptive radiations

JI Meier, DA Marques, S Mwaiko, CE Wagner… - Nature …, 2017 - nature.com
Understanding why some evolutionary lineages generate exceptionally high species
diversity is an important goal in evolutionary biology. Haplochromine cichlid fishes of Africa's …