Bacterial defences: mechanisms, evolution and antimicrobial resistance

WPJ Smith, BR Wucher, CD Nadell… - Nature Reviews …, 2023 - nature.com
Throughout their evolutionary history, bacteria have faced diverse threats from other
microorganisms, including competing bacteria, bacteriophages and predators. In response …

Microbial interactions within the plant holobiont

MA Hassani, P Durán, S Hacquard - Microbiome, 2018 - Springer
Since the colonization of land by ancestral plant lineages 450 million years ago, plants and
their associated microbes have been interacting with each other, forming an assemblage of …

Trophic interactions and the drivers of microbial community assembly

M Gralka, R Szabo, R Stocker, OX Cordero - Current Biology, 2020 - cell.com
Despite numerous surveys of gene and species content in heterotrophic microbial
communities, such as those found in animal guts, oceans, or soils, it is still unclear whether …

The evolution and ecology of bacterial warfare

ET Granato, TA Meiller-Legrand, KR Foster - Current biology, 2019 - cell.com
Bacteria have evolved a wide range of mechanisms to harm and kill their competitors,
including chemical, mechanical and biological weapons. Here we review the incredible …

Positive interactions are common among culturable bacteria

J Kehe, A Ortiz, A Kulesa, J Gore, PC Blainey… - Science …, 2021 - science.org
Interspecies interactions shape the structure and function of microbial communities. In
particular, positive, growth-promoting interactions can substantially affect the diversity and …

Challenges in microbial ecology: building predictive understanding of community function and dynamics

S Widder, RJ Allen, T Pfeiffer, TP Curtis, C Wiuf… - The ISME …, 2016 - academic.oup.com
The importance of microbial communities (MCs) cannot be overstated. MCs underpin the
biogeochemical cycles of the earth's soil, oceans and the atmosphere, and perform …

Massively parallel screening of synthetic microbial communities

J Kehe, A Kulesa, A Ortiz… - Proceedings of the …, 2019 - National Acad Sciences
Microbial communities have numerous potential applications in biotechnology, agriculture,
and medicine. Nevertheless, the limited accuracy with which we can predict interspecies …

Probiotics and competitive exclusion of pathogens in shrimp aquaculture

H Knipe, B Temperton, A Lange, D Bass… - Reviews in …, 2021 - Wiley Online Library
Probiotics, live microorganisms that, when administered in adequate amounts, confer a
health benefit on the host, offer an alternative to antibiotics and have become popular …

Associations and dynamics of Vibrionaceae in the environment, from the genus to the population level

AF Takemura, DM Chien, MF Polz - Frontiers in microbiology, 2014 - frontiersin.org
The Vibrionaceae, which encompasses several potential pathogens, including V. cholerae,
the causative agent of cholera, and V. vulnificus, the deadliest seafood-borne pathogen, are …

Counteraction of antibiotic production and degradation stabilizes microbial communities

ED Kelsic, J Zhao, K Vetsigian, R Kishony - Nature, 2015 - nature.com
A major challenge in theoretical ecology is understanding how natural microbial
communities support species diversity,,,,,,,, and in particular how antibiotic-producing …