A checklist for maximizing reproducibility of ecological niche models

X Feng, DS Park, C Walker, AT Peterson… - Nature Ecology & …, 2019 - nature.com
Reporting specific modelling methods and metadata is essential to the reproducibility of
ecological studies, yet guidelines rarely exist regarding what information should be noted …

[HTML][HTML] Fishes of the upper rio Paraná basin: diversity, biogeography and conservation

FCP Dagosta, MS Monção, BA Nagamatsu… - Neotropical …, 2024 - SciELO Brasil
The upper rio Paraná basin drains the most developed and environmentally degraded
region in South America: the Brazilian southeast. While it is one of the most well-known …

Top ten hazards to avoid when modeling species distributions: a didactic guide of assumptions, problems, and recommendations

M Soley‐Guardia, DF Alvarado‐Serrano… - Ecography, 2024 - Wiley Online Library
Species distribution models, also known as ecological niche models or habitat suitability
models, have become commonplace for addressing fundamental and applied biodiversity …

CoordinateCleaner: Standardized cleaning of occurrence records from biological collection databases

A Zizka, D Silvestro, T Andermann… - Methods in Ecology …, 2019 - Wiley Online Library
Species occurrence records from online databases are an indispensable resource in
ecological, biogeographical and palaeontological research. However, issues with data …

ConR: An R package to assist large‐scale multispecies preliminary conservation assessments using distribution data

G Dauby, T Stévart, V Droissart, A Cosiaux… - Ecology and …, 2017 - Wiley Online Library
Abstract The Red List Categories and the accompanying five criteria developed by the
International Union for Conservation of Nature (IUCN) provide an authoritative and …

No one-size-fits-all solution to clean GBIF

A Zizka, FA Carvalho, A Calvente, MR Baez-Lizarazo… - PeerJ, 2020 - peerj.com
Species occurrence records provide the basis for many biodiversity studies. They derive
from georeferenced specimens deposited in natural history collections and visual …

[HTML][HTML] A curated list of R packages for ecological niche modelling

N Sillero, JC Campos, S Arenas-Castro… - Ecological Modelling, 2023 - Elsevier
The R language provides most applications (packages) currently available for ecological
niche modelling. In the last few years, these packages have increased substantially. There …

Herbarium data: Global biodiversity and societal botanical needs for novel research

SA James, PS Soltis, L Belbin… - Applications in plant …, 2018 - Wiley Online Library
Building on centuries of research based on herbarium specimens gathered through time
and around the globe, a new era of discovery, synthesis, and prediction using digitized …

bdc: A toolkit for standardizing, integrating and cleaning biodiversity data

BR Ribeiro, SJE Velazco… - Methods in Ecology …, 2022 - Wiley Online Library
The increase in online and openly accessible biodiversity databases provides a vast and
invaluable resource to support research and policy. However, without scrutiny, errors in …

Big data of tree species distributions: how big and how good?

JM Serra-Diaz, BJ Enquist, B Maitner, C Merow… - Forest …, 2017 - Springer
Background Trees play crucial roles in the biosphere and societies worldwide, with a total of
60,065 tree species currently identified. Increasingly, a large amount of data on tree species …