Analysing ecological networks of species interactions

E Delmas, M Besson, MH Brice, LA Burkle… - Biological …, 2019 - Wiley Online Library
Network approaches to ecological questions have been increasingly used, particularly in
recent decades. The abstraction of ecological systems–such as communities–through …

Modeling species and community responses to past, present, and future episodes of climatic and ecological change

KC Maguire, D Nieto-Lugilde… - Annual Review of …, 2015 - annualreviews.org
There is an urgent need to understand species and community responses to climatic and
ecological changes to predict biodiversity patterns given anticipated global change. The …

[HTML][HTML] Cautionary notes on the use of co-occurrence networks in soil ecology

M Goberna, M Verdú - Soil Biology and Biochemistry, 2022 - Elsevier
Soil ecology is witnessing exponential growth in the number of studies using co-occurrence
network analysis. Researchers reconstruct networks based on the co-occurrence of taxa or …

Biotic interactions in species distribution modelling: 10 questions to guide interpretation and avoid false conclusions

CF Dormann, M Bobrowski, DM Dehling… - Global ecology and …, 2018 - Wiley Online Library
Aim Recent studies increasingly use statistical methods to infer biotic interactions from co‐
occurrence information at a large spatial scale. However, disentangling biotic interactions …

Disentangling biotic interactions, environmental filters, and dispersal limitation as drivers of species co‐occurrence

M D'Amen, HK Mod, NJ Gotelli, A Guisan - Ecography, 2018 - Wiley Online Library
A key focus in ecology is to search for community assembly rules. Here we compare two
community modelling frameworks that integrate a combination of environmental and spatial …

Contributions of Quaternary botany to modern ecology and biogeography

HJB Birks - Plant Ecology & Diversity, 2019 - Taylor & Francis
ABSTRACT Quaternary (last 2.6 million years) botany involves studying plant megafossils
(eg tree stumps), macrofossils (eg seeds, leaves), and microfossils (eg pollen, spores) …

Community ecology in a changing environment: Perspectives from the Quaternary

ST Jackson, JL Blois - Proceedings of the National Academy of Sciences, 2015 - pnas.org
Community ecology and paleoecology are both concerned with the composition and
structure of biotic assemblages but are largely disconnected. Community ecology focuses …

Holocene shifts in the assembly of plant and animal communities implicate human impacts

S Kathleen Lyons, KL Amatangelo, AK Behrensmeyer… - Nature, 2016 - nature.com
Understanding how ecological communities are organized and how they change through
time is critical to predicting the effects of climate change. Recent work documenting the co …

Biology in the Anthropocene: Challenges and insights from young fossil records

SM Kidwell - Proceedings of the National Academy of Sciences, 2015 - pnas.org
With overwhelming evidence of change in habitats, biologists today must assume that few, if
any, study areas are natural and that biological variability is superimposed on trends rather …

A network approach for inferring species associations from co‐occurrence data

N Morueta‐Holme, B Blonder, B Sandel, BJ McGill… - …, 2016 - Wiley Online Library
Positive and negative associations between species are a key outcome of community
assembly from regional species pools. These associations are difficult to detect and can be …