Medical image segmentation review: The success of u-net

R Azad, EK Aghdam, A Rauland, Y Jia… - … on Pattern Analysis …, 2024 - ieeexplore.ieee.org
Automatic medical image segmentation is a crucial topic in the medical domain and
successively a critical counterpart in the computer-aided diagnosis paradigm. U-Net is the …

Foundation Models Defining a New Era in Vision: a Survey and Outlook

M Awais, M Naseer, S Khan, RM Anwer… - … on Pattern Analysis …, 2025 - ieeexplore.ieee.org
Vision systems that see and reason about the compositional nature of visual scenes are
fundamental to understanding our world. The complex relations between objects and their …

Cellpose 2.0: how to train your own model

M Pachitariu, C Stringer - Nature methods, 2022 - nature.com
Pretrained neural network models for biological segmentation can provide good out-of-the-
box results for many image types. However, such models do not allow users to adapt the …

Transformers in medical imaging: A survey

F Shamshad, S Khan, SW Zamir, MH Khan… - Medical Image …, 2023 - Elsevier
Following unprecedented success on the natural language tasks, Transformers have been
successfully applied to several computer vision problems, achieving state-of-the-art results …

Learning with limited annotations: a survey on deep semi-supervised learning for medical image segmentation

R Jiao, Y Zhang, L Ding, B Xue, J Zhang, R Cai… - Computers in Biology …, 2024 - Elsevier
Medical image segmentation is a fundamental and critical step in many image-guided
clinical approaches. Recent success of deep learning-based segmentation methods usually …

Uctransnet: rethinking the skip connections in u-net from a channel-wise perspective with transformer

H Wang, P Cao, J Wang, OR Zaiane - Proceedings of the AAAI …, 2022 - ojs.aaai.org
Most recent semantic segmentation methods adopt a U-Net framework with an encoder-
decoder architecture. It is still challenging for U-Net with a simple skip connection scheme to …

Medical transformer: Gated axial-attention for medical image segmentation

JMJ Valanarasu, P Oza, I Hacihaliloglu… - Medical image computing …, 2021 - Springer
Over the past decade, deep convolutional neural networks have been widely adopted for
medical image segmentation and shown to achieve adequate performance. However, due …

Transforming medical imaging with Transformers? A comparative review of key properties, current progresses, and future perspectives

J Li, J Chen, Y Tang, C Wang, BA Landman… - Medical image …, 2023 - Elsevier
Transformer, one of the latest technological advances of deep learning, has gained
prevalence in natural language processing or computer vision. Since medical imaging bear …

Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning

NF Greenwald, G Miller, E Moen, A Kong, A Kagel… - Nature …, 2022 - nature.com
A principal challenge in the analysis of tissue imaging data is cell segmentation—the task of
identifying the precise boundary of every cell in an image. To address this problem we …

Segdiff: Image segmentation with diffusion probabilistic models

T Amit, T Shaharbany, E Nachmani, L Wolf - arxiv preprint arxiv …, 2021 - arxiv.org
Diffusion Probabilistic Methods are employed for state-of-the-art image generation. In this
work, we present a method for extending such models for performing image segmentation …