CRISPR technologies for precise epigenome editing

M Nakamura, Y Gao, AA Dominguez, LS Qi - Nature Cell Biology, 2021 - nature.com
The epigenome involves a complex set of cellular processes governing genomic activity.
Dissecting this complexity necessitates the development of tools capable of specifically …

Gene editing and CRISPR in the clinic: current and future perspectives

MP Hirakawa, R Krishnakumar, JA Timlin… - Bioscience …, 2020 - portlandpress.com
Genome editing technologies, particularly those based on zinc-finger nucleases (ZFNs),
transcription activator-like effector nucleases (TALENs), and CRISPR (clustered regularly …

Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability

A de Mendoza, TV Nguyen, E Ford, D Poppe… - Genome Biology, 2022 - Springer
Background Cytosine DNA methylation is widely described as a transcriptional repressive
mark with the capacity to silence promoters. Epigenome engineering techniques enable …

DNA methylation in plants: mechanisms and tools for targeted manipulation

J Gallego‐Bartolomé - New Phytologist, 2020 - Wiley Online Library
DNA methylation is an epigenetic mark that regulates multiple processes, such as gene
expression and genome stability. Mutants and pharmacological treatments have been …

[HTML][HTML] Downregulation of SNCA expression by targeted editing of DNA methylation: a potential strategy for precision therapy in PD

B Kantor, L Tagliafierro, J Gu, ME Zamora, E Ilich… - Molecular therapy, 2018 - cell.com
Elevated levels of SNCA have been implicated in the pathogenesis of Parkinson's disease
(PD), while normal physiological levels of SNCA are needed to maintain neuronal function …

CRISPR/dCas9 tools: epigenetic mechanism and application in gene transcriptional regulation

R Cai, R Lv, X Shi, G Yang, J ** - International journal of molecular …, 2023 - mdpi.com
CRISPR/Cas9-mediated cleavage of DNA, which depends on the endonuclease activity of
Cas9, has been widely used for gene editing due to its excellent programmability and …

Ezh2-dCas9 and KRAB-dCas9 enable engineering of epigenetic memory in a context-dependent manner

H O'Geen, SL Bates, SS Carter, KA Nisson… - Epigenetics & …, 2019 - Springer
Background Rewriting of the epigenome has risen as a promising alternative to gene editing
for precision medicine. In nature, epigenetic silencing can result in complete attenuation of …

Toward the development of epigenome editing-based therapeutics: potentials and challenges

J Ueda, T Yamazaki, H Funakoshi - International Journal of Molecular …, 2023 - mdpi.com
The advancement in epigenetics research over the past several decades has led to the
potential application of epigenome-editing technologies for the treatment of various …

Epigenome editing for targeted DNA (de) methylation: a new perspective in modulating gene expression

K Seem, S Kaur, S Kumar… - Critical Reviews in …, 2024 - Taylor & Francis
Traditionally, it has been believed that inheritance is driven as phenotypic variations
resulting from changes in DNA sequence. However, this paradigm has been challenged and …

The design and application of DNA-editing enzymes as base editors

KL Rallapalli, AC Komor - Annual review of biochemistry, 2023 - annualreviews.org
DNA-editing enzymes perform chemical reactions on DNA nucleobases. These reactions
can change the genetic identity of the modified base or modulate gene expression. Interest …