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Physics of viral dynamics
Viral capsids are often regarded as inert structural units, but in actuality they display
fascinating dynamics during different stages of their life cycle. With the advent of single …
fascinating dynamics during different stages of their life cycle. With the advent of single …
Integrated In-Plane Nanofluidic Devices for Resistive-Pulse Sensing
TW Young, MP Kappler, ED Call… - Annual Review of …, 2024 - annualreviews.org
Single-entity (or digital) measurements enhance sensitivity (10-to 100-fold improvement)
and uncover heterogeneity within a population (one event in 100 to 10,000). Many biological …
and uncover heterogeneity within a population (one event in 100 to 10,000). Many biological …
Nanofluidic devices and applications for biological analyses
K Yamamoto, N Ota, Y Tanaka - Analytical Chemistry, 2020 - ACS Publications
As analytical interests have become targeted on sensitive detection of objects of a tiny size
and volume, various fields in analytical chemistry have been developed to overcome …
and volume, various fields in analytical chemistry have been developed to overcome …
Seeing biomolecular condensates through the lens of viruses
Phase separation of viral biopolymers is a key factor in the formation of cytoplasmic viral
inclusions, known as sites of virus replication and assembly. This review describes the …
inclusions, known as sites of virus replication and assembly. This review describes the …
Virus self-assembly proceeds through contact-rich energy minima
Self-assembly of supramolecular complexes such as viral capsids occurs prominently in
nature. Nonetheless, the mechanisms underlying these processes remain poorly …
nature. Nonetheless, the mechanisms underlying these processes remain poorly …
Multiscale modeling of hepatitis B virus capsid assembly and its dimorphism
Hepatitis B virus (HBV) is an endemic, chronic virus that leads to 800000 deaths per year.
Central to the HBV lifecycle, the viral core has a protein capsid assembled from many copies …
Central to the HBV lifecycle, the viral core has a protein capsid assembled from many copies …
Rapidly forming early intermediate structures dictate the pathway of capsid assembly
There are∼ 1030 possible intermediates on the assembly path from hepatitis B capsid
protein dimers to the 120-dimer capsid. If every intermediate was tested, assembly would …
protein dimers to the 120-dimer capsid. If every intermediate was tested, assembly would …
Markov state model approach to simulate self-assembly
A Trubiano, MF Hagan - Physical Review X, 2024 - APS
Computational modeling of assembly is challenging for many systems, because their
timescales can vastly exceed those accessible to simulations. This article describes the …
timescales can vastly exceed those accessible to simulations. This article describes the …
Viral structural proteins as targets for antivirals
Viral structural proteins are emerging as effective targets for new antivirals. In a viral
lifecycle, the capsid must assemble, disassemble, and respond to host proteins, all at the …
lifecycle, the capsid must assemble, disassemble, and respond to host proteins, all at the …
Local stabilization of subunit–subunit contacts causes global destabilization of hepatitis B virus capsids
Development of antiviral molecules that bind virion is a strategy that remains in its infancy,
and the details of their mechanisms are poorly understood. Here we investigate the behavior …
and the details of their mechanisms are poorly understood. Here we investigate the behavior …