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Genome structural variation discovery and genoty**
Comparisons of human genomes show that more base pairs are altered as a result of
structural variation—including copy number variation—than as a result of point mutations …
structural variation—including copy number variation—than as a result of point mutations …
Cancer genomics: technology, discovery, and translation
B Tran, JE Dancey, S Kamel-Reid… - Journal of Clinical …, 2012 - ascopubs.org
In recent years, the increasing awareness that somatic mutations and other genetic
aberrations drive human malignancies has led us within reach of personalized cancer …
aberrations drive human malignancies has led us within reach of personalized cancer …
Comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants
We have systematically compared copy number variant (CNV) detection on eleven
microarrays to evaluate data quality and CNV calling, reproducibility, concordance across …
microarrays to evaluate data quality and CNV calling, reproducibility, concordance across …
CopywriteR: DNA copy number detection from off-target sequence data
T Kuilman, A Velds, K Kemper, M Ranzani… - Genome biology, 2015 - Springer
Current methods for detection of copy number variants (CNV) and aberrations (CNA) from
targeted sequencing data are based on the depth of coverage of captured exons. Accurate …
targeted sequencing data are based on the depth of coverage of captured exons. Accurate …
A discovery resource of rare copy number variations in individuals with autism spectrum disorder
The identification of rare inherited and de novo copy number variations (CNVs) in human
subjects has proven a productive approach to highlight risk genes for autism spectrum …
subjects has proven a productive approach to highlight risk genes for autism spectrum …
Genomic amplifications and distal 6q loss: novel markers for poor survival in high-risk neuroblastoma patients
Background Neuroblastoma is characterized by substantial clinical heterogeneity. Despite
intensive treatment, the survival rates of high-risk neuroblastoma patients are still …
intensive treatment, the survival rates of high-risk neuroblastoma patients are still …
Copy number variation in the genomes of domestic animals
A Clop, O Vidal, M Amills - Animal genetics, 2012 - Wiley Online Library
Copy number variation (CNV) might be one of the main contributors to phenotypic diversity
and evolutionary adaptation in animals and plants, employing a wide variety of mechanisms …
and evolutionary adaptation in animals and plants, employing a wide variety of mechanisms …
Chromosomes in the flow to simplify genome analysis
J Doležel, J Vrána, J Šafář, J Bartoš… - Functional & integrative …, 2012 - Springer
Nuclear genomes of human, animals, and plants are organized into subunits called
chromosomes. When isolated into aqueous suspension, mitotic chromosomes can be …
chromosomes. When isolated into aqueous suspension, mitotic chromosomes can be …
Male-biased autosomal effect of 16p13. 11 copy number variation in neurodevelopmental disorders
Copy number variants (CNVs) at chromosome 16p13. 11 have been associated with a
range of neurodevelopmental disorders including autism, ADHD, intellectual disability and …
range of neurodevelopmental disorders including autism, ADHD, intellectual disability and …
Genomic architecture characterizes tumor progression paths and fate in breast cancer patients
HG Russnes, HKM Vollan, OC Lingjærde… - Science translational …, 2010 - science.org
Distinct molecular subtypes of breast carcinomas have been identified, but translation into
clinical use has been limited. We have developed two platform-independent algorithms to …
clinical use has been limited. We have developed two platform-independent algorithms to …