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The transformational role of GPU computing and deep learning in drug discovery
Deep learning has disrupted nearly every field of research, including those of direct
importance to drug discovery, such as medicinal chemistry and pharmacology. This …
importance to drug discovery, such as medicinal chemistry and pharmacology. This …
A review of molecular representation in the age of machine learning
Research in chemistry increasingly requires interdisciplinary work prompted by, among
other things, advances in computing, machine learning, and artificial intelligence. Everyone …
other things, advances in computing, machine learning, and artificial intelligence. Everyone …
Reinforcement learning in healthcare: A survey
As a subfield of machine learning, reinforcement learning (RL) aims at optimizing decision
making by using interaction samples of an agent with its environment and the potentially …
making by using interaction samples of an agent with its environment and the potentially …
Graphaf: a flow-based autoregressive model for molecular graph generation
Molecular graph generation is a fundamental problem for drug discovery and has been
attracting growing attention. The problem is challenging since it requires not only generating …
attracting growing attention. The problem is challenging since it requires not only generating …
Deep learning for molecular design—a review of the state of the art
In the space of only a few years, deep generative modeling has revolutionized how we think
of artificial creativity, yielding autonomous systems which produce original images, music …
of artificial creativity, yielding autonomous systems which produce original images, music …
GuacaMol: benchmarking models for de novo molecular design
De novo design seeks to generate molecules with required property profiles by virtual
design-make-test cycles. With the emergence of deep learning and neural generative …
design-make-test cycles. With the emergence of deep learning and neural generative …
Constrained graph variational autoencoders for molecule design
Graphs are ubiquitous data structures for representing interactions between entities. With an
emphasis on applications in chemistry, we explore the task of learning to generate graphs …
emphasis on applications in chemistry, we explore the task of learning to generate graphs …
Artificial intelligence in drug discovery: applications and techniques
Artificial intelligence (AI) has been transforming the practice of drug discovery in the past
decade. Various AI techniques have been used in many drug discovery applications, such …
decade. Various AI techniques have been used in many drug discovery applications, such …
Computer-aided multi-objective optimization in small molecule discovery
Molecular discovery is a multi-objective optimization problem that requires identifying a
molecule or set of molecules that balance multiple, often competing, properties. Multi …
molecule or set of molecules that balance multiple, often competing, properties. Multi …
A graph-based genetic algorithm and generative model/Monte Carlo tree search for the exploration of chemical space
JH Jensen - Chemical science, 2019 - pubs.rsc.org
This paper presents a comparison of a graph-based genetic algorithm (GB-GA) and
machine learning (ML) results for the optimization of log P values with a constraint for …
machine learning (ML) results for the optimization of log P values with a constraint for …