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Cell and molecular mechanics of biological materials
Living cells can sense mechanical forces and convert them into biological responses.
Similarly, biological and biochemical signals are known to influence the abilities of cells to …
Similarly, biological and biochemical signals are known to influence the abilities of cells to …
Activating transcription in bacteria
Bacteria use a variety of mechanisms to direct RNA polymerase to specific promoters in
order to activate transcription in response to growth signals or environmental cues …
order to activate transcription in response to growth signals or environmental cues …
Architecture of the Escherichia coli nucleoid
SC Verma, Z Qian, SL Adhya - PLoS genetics, 2019 - journals.plos.org
How genomes are organized within cells and how the 3D architecture of a genome
influences cellular functions are significant questions in biology. A bacterial genomic DNA …
influences cellular functions are significant questions in biology. A bacterial genomic DNA …
[Књига][B] DNA topology
DNA as the genetic material is a topic of intense interest in the 21st century, with the
genomes of many organisms having been sequenced. The double helix structure …
genomes of many organisms having been sequenced. The double helix structure …
DNA supercoiling—a global transcriptional regulator for enterobacterial growth?
A Travers, G Muskhelishvili - Nature Reviews Microbiology, 2005 - nature.com
A fundamental principle of exponential bacterial growth is that no more ribosomes are
produced than are necessary to support the balance between nutrient availability and …
produced than are necessary to support the balance between nutrient availability and …
Nucleoid-associated proteins shape chromatin structure and transcriptional regulation across the bacterial kingdom
Genome architecture has proven to be critical in determining gene regulation across almost
all domains of life. While many of the key components and mechanisms of eukaryotic …
all domains of life. While many of the key components and mechanisms of eukaryotic …
Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts
We determined the genome-wide distribution of the nucleoid-associated protein Fis in
Escherichia coli using chromatin immunoprecipitation coupled with high-resolution whole …
Escherichia coli using chromatin immunoprecipitation coupled with high-resolution whole …
Homeostatic regulation of supercoiling sensitivity coordinates transcription of the bacterial genome
N Blot, R Mavathur, M Geertz, A Travers… - EMBO …, 2006 - embopress.org
Regulation of cellular growth implies spatiotemporally coordinated programmes of gene
transcription. A central question, therefore, is how global transcription is coordinated in the …
transcription. A central question, therefore, is how global transcription is coordinated in the …
Concentration-dependent exchange accelerates turnover of proteins bound to double-stranded DNA
JS Graham, RC Johnson, JF Marko - Nucleic acids research, 2011 - academic.oup.com
The multistep kinetics through which DNA-binding proteins bind their targets are heavily
studied, but relatively little attention has been paid to proteins leaving the double helix …
studied, but relatively little attention has been paid to proteins leaving the double helix …
A DNA architectural protein couples cellular physiology and DNA topology in Escherichia coli
R Schneider, A Travers, T Kutateladze… - Molecular …, 1999 - Wiley Online Library
In Escherichia coli, the transcriptional activity of many promoters is strongly dependent on
the negative superhelical density of chromosomal DNA. This, in turn, varies with the growth …
the negative superhelical density of chromosomal DNA. This, in turn, varies with the growth …