Optimal transport for single-cell and spatial omics

C Bunne, G Schiebinger, A Krause, A Regev… - Nature Reviews …, 2024 - nature.com
High-throughput single-cell profiling provides an unprecedented ability to uncover the
molecular states of millions of cells. These technologies are, however, destructive to cells …

Recovering single-cell expression profiles from spatial transcriptomics with scResolve

H Chen, YJ Lee, JA Ovando-Ricardez, L Rosas… - Cell Reports …, 2024 - cell.com
Many popular spatial transcriptomics techniques lack single-cell resolution. Instead, these
methods measure the collective gene expression for each location from a mixture of cells …

[HTML][HTML] scResolve: Recovering single cell expression profiles from multi-cellular spatial transcriptomics

H Chen, YJ Lee, JA Ovando, L Rosas, M Rojas… - bioRxiv, 2023 - ncbi.nlm.nih.gov
Many popular spatial transcriptomics techniques lack single-cell resolution. Instead, these
methods measure the collective gene expression for each location from a mixture of cells …