Extracting information from textual documents in the electronic health record: a review of recent research

SM Meystre, GK Savova… - Yearbook of medical …, 2008 - thieme-connect.com
Objectives We examine recent published research on the extraction of information from
textual documents in the Electronic Health Record (EHR). Methods Literature review of the …

Effective map** of biomedical text to the UMLS Metathesaurus: the MetaMap program

AR Aronson - Proceedings of the AMIA Symposium, 2001 - pmc.ncbi.nlm.nih.gov
The UMLS Metathesaurus, the largest thesaurus in the biomedical domain, provides a
representation of biomedical knowledge consisting of concepts classified by semantic type …

Automated encoding of clinical documents based on natural language processing

C Friedman, L Shagina, Y Lussier… - Journal of the American …, 2004 - academic.oup.com
Objective: The aim of this study was to develop a method based on natural language
processing (NLP) that automatically maps an entire clinical document to codes with …

Biomedical ontologies in action: role in knowledge management, data integration and decision support

O Bodenreider - Yearbook of medical informatics, 2008 - thieme-connect.com
Objectives To provide typical examples of biomedical ontologies in action, emphasizing the
role played by biomedical ontologies in knowledge management, data integration and …

[HTML][HTML] An ontology of randomized controlled trials for evidence-based practice: content specification and evaluation using the competency decomposition method

I Sim, B Olasov, S Carini - Journal of Biomedical Informatics, 2004 - Elsevier
Randomized controlled trials (RCTs) are one of the least biased sources of clinical research
evidence, and are therefore a critical resource for the practice of evidence-based medicine …

[BOG][B] Medical informatics: knowledge management and data mining in biomedicine

H Chen, SS Fuller, C Friedman, W Hersh - 2006 - books.google.com
Medical Informatics and biomedical computing have grown in quantum measure over the
past decade. An abundance of advances have come to the foreground in this field with the …

Map** abbreviations to full forms in biomedical articles

H Yu, G Hripcsak, C Friedman - Journal of the American Medical …, 2002 - academic.oup.com
Objective: To develop methods that automatically map abbreviations to their full forms in
biomedical articles. Methods: The authors developed two methods of map** defined and …

Automation of a problem list using natural language processing

S Meystre, PJ Haug - BMC medical informatics and decision making, 2005 - Springer
Background The medical problem list is an important part of the electronic medical record in
development in our institution. To serve the functions it is designed for, the problem list has …

MediClass: A system for detecting and classifying encounter-based clinical events in any electronic medical record

B Hazlehurst, HR Frost, DF Sittig… - Journal of the American …, 2005 - academic.oup.com
MediClass is a knowledge-based system that processes both free-text and coded data to
automatically detect clinical events in electronic medical records (EMRs). This technology …

IndexFinder: a method of extracting key concepts from clinical texts for indexing

Q Zou, WW Chu, C Morioka, GH Leazer… - AMIA annual …, 2003 - pmc.ncbi.nlm.nih.gov
Extracting key concepts from clinical texts for indexing is an important task in implementing a
medical digital library. Several methods are proposed for map** free text into standard …