Bacterial siderophores in community and host interactions

J Kramer, Ö Özkaya, R Kümmerli - Nature Reviews Microbiology, 2020 - nature.com
Iron is an essential trace element for most organisms. A common way for bacteria to acquire
this nutrient is through the secretion of siderophores, which are secondary metabolites that …

Frenemies of the soil: Bacillus and Pseudomonas interspecies interactions

M Lyng, ÁT Kovács - Trends in microbiology, 2023 - cell.com
Bacillus and Pseudomonas ubiquitously occur in natural environments and are two of the
most intensively studied bacterial genera in the soil. They are often coisolated from …

Genome-resolved metagenomics reveals role of iron metabolism in drought-induced rhizosphere microbiome dynamics

L Xu, Z Dong, D Chiniquy, G Pierroz, S Deng… - Nature …, 2021 - nature.com
Recent studies have demonstrated that drought leads to dramatic, highly conserved shifts in
the root microbiome. At present, the molecular mechanisms underlying these responses …

[HTML][HTML] Vaginal Lactobacillus fatty acid response mechanisms reveal a metabolite-targeted strategy for bacterial vaginosis treatment

M Zhu, MW Frank, CD Radka, S Jeanfavre, J Xu… - Cell, 2024 - cell.com
Bacterial vaginosis (BV), a common syndrome characterized by Lactobacillus-deficient
vaginal microbiota, is associated with adverse health outcomes. BV often recurs after …

Characteristics of microbial denitrification under different aeration intensities: Performance, mechanism, and co-occurrence network

H Yuan, S Huang, J Yuan, Y You, Y Zhang - Science of the Total …, 2021 - Elsevier
This study aimed to explore how dissolved oxygen (DO) affected the characteristics and
mechanisms of denitrification in mixed bacterial consortia. We analyzed denitrification …

[HTML][HTML] Metabolic modelling approaches for describing and engineering microbial communities

B García-Jiménez, J Torres-Bacete… - Computational and …, 2021 - Elsevier
Microbes do not live in isolation but in microbial communities. The relevance of microbial
communities is increasing due to growing awareness of their influence on a huge number of …

The initial inoculation ratio regulates bacterial coculture interactions and metabolic capacity

CH Gao, H Cao, P Cai, SJ Sørensen - The ISME journal, 2021 - academic.oup.com
Coculture is an important model system in microbial ecology studies. As a key experimental
parameter, the initial inoculation ratio has a crucial impact on the results of the coculture …

Nitrogen removal by mix-cultured aerobic denitrifying bacteria isolated by ultrasound: performance, co-occurrence pattern and wastewater treatment

H Zhang, Z Zhao, S Li, S Chen, T Huang, N Li… - Chemical Engineering …, 2019 - Elsevier
Single aerobic denitrifying bacterial strains have been studied extensively; considerably less
attention has been paid to mix-cultured aerobic denitrifying bacteria (Mix-CADB). Herein …

Directed regulation of anammox communities based on exogenous siderophores for highly efficient nitrogen removal

Z Dong, M Yu, Y Cai, Y Ma, Y Chen, B Hu - Water Research, 2023 - Elsevier
It is expected that the quicker domestication of anaerobic ammonia oxidation (anammox)
communities and the enhancement of their nitrogen transformation capability can be …

A framework for understanding collective microbiome metabolism

M Huelsmann, OT Schubert, M Ackermann - Nature Microbiology, 2024 - nature.com
Microbiome metabolism underlies numerous vital ecosystem functions. Individual
microbiome members often perform partial catabolism of substrates or do not express all of …