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Computational modeling of realistic cell membranes
Cell membranes contain a large variety of lipid types and are crowded with proteins,
endowing them with the plasticity needed to fulfill their key roles in cell functioning. The …
endowing them with the plasticity needed to fulfill their key roles in cell functioning. The …
Multiscale simulations of biological membranes: the challenge to understand biological phenomena in a living substance
Biological membranes are tricky to investigate. They are complex in terms of molecular
composition and structure, functional over a wide range of time scales, and characterized by …
composition and structure, functional over a wide range of time scales, and characterized by …
Lipid organization of the plasma membrane
The detailed organization of cellular membranes remains rather elusive. Based on large-
scale molecular dynamics simulations, we provide a high-resolution view of the lipid …
scale molecular dynamics simulations, we provide a high-resolution view of the lipid …
Perspective on the Martini model
The Martini model, a coarse-grained force field for biomolecular simulations, has found a
broad range of applications since its release a decade ago. Based on a building block …
broad range of applications since its release a decade ago. Based on a building block …
Improved parameters for the martini coarse-grained protein force field
The Martini coarse-grained force field has been successfully used for simulating a wide
range of (bio) molecular systems. Recent progress in our ability to test the model against …
range of (bio) molecular systems. Recent progress in our ability to test the model against …
Low membrane fluidity triggers lipid phase separation and protein segregation in living bacteria
M Gohrbandt, A Lipski, JW Grimshaw… - The EMBO …, 2022 - embopress.org
All living organisms adapt their membrane lipid composition in response to changes in their
environment or diet. These conserved membrane‐adaptive processes have been studied …
environment or diet. These conserved membrane‐adaptive processes have been studied …
The power of coarse graining in biomolecular simulations
Computational modeling of biological systems is challenging because of the multitude of
spatial and temporal scales involved. Replacing atomistic detail with lower resolution …
spatial and temporal scales involved. Replacing atomistic detail with lower resolution …
Biological membrane organization and cellular signaling
To execute their many vital functions, cell membranes are highly organized. Here, we review
how membrane structure shapes signal transduction across membranes. Recent …
how membrane structure shapes signal transduction across membranes. Recent …
Mitochondrial lipid trafficking
Mitochondria are dynamic organelles surrounded by two membranes with a defined lipid
composition. The majority of lipids are synthesized in the endoplasmic reticulum (ER) and …
composition. The majority of lipids are synthesized in the endoplasmic reticulum (ER) and …
Monolayer spontaneous curvature of raft-forming membrane lipids
Monolayer spontaneous curvatures for cholesterol, DOPE, POPE, DOPC, DPPC, DSPC,
POPC, SOPC, and egg sphingomyelin were obtained using small-angle X-ray scattering …
POPC, SOPC, and egg sphingomyelin were obtained using small-angle X-ray scattering …