Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap
T Cordier, L Alonso‐Sáez… - Molecular …, 2021 - Wiley Online Library
A decade after environmental scientists integrated high‐throughput sequencing
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …
Marine biomonitoring with eDNA: Can metabarcoding of water samples cut it as a tool for surveying benthic communities?
In the marine realm, biomonitoring using environmental DNA (eDNA) of benthic
communities requires destructive direct sampling or the setting‐up of settlement structures …
communities requires destructive direct sampling or the setting‐up of settlement structures …
Seasonality of primary production explains the richness of pioneering benthic communities
M Cecchetto, A Dettai, C Gallut, M Obst… - Nature …, 2024 - nature.com
A pattern of increasing species richness from the poles to the equator is frequently observed
in many animal taxa. Ecological limits, determined by the abiotic conditions and biotic …
in many animal taxa. Ecological limits, determined by the abiotic conditions and biotic …
Red Sea atlas of coral-associated bacteria highlights common microbiome members and their distribution across environmental gradients—a systematic review
The Red Sea is a suitable model for studying coral reefs under climate change due to its
strong environmental gradient that provides a window into future global warming scenarios …
strong environmental gradient that provides a window into future global warming scenarios …
DNA metabarcoding marker choice skews perception of marine eukaryotic biodiversity
DNA metabarcoding is an increasingly popular technique to investigate biodiversity;
however, many methodological unknowns remain, especially concerning the biases …
however, many methodological unknowns remain, especially concerning the biases …
Seq'and ARMS shall find: DNA (meta) barcoding of Autonomous Reef Monitoring Structures across the tree of life uncovers hidden cryptobiome of tropical urban coral …
Coral reefs are among the richest marine ecosystems on Earth, but there remains much
diversity hidden within cavities of complex reef structures awaiting discovery. While the …
diversity hidden within cavities of complex reef structures awaiting discovery. While the …
MinION-in-ARMS: nanopore sequencing to expedite barcoding of specimen-rich macrofaunal samples from autonomous reef monitoring structures
Autonomous Reef Monitoring Structure (ARMS) are standardized devices for sampling
biodiversity in complex marine benthic habitats such as coral reefs. When coupled with DNA …
biodiversity in complex marine benthic habitats such as coral reefs. When coupled with DNA …
Pan‐regional marine benthic cryptobiome biodiversity patterns revealed by metabarcoding Autonomous Reef Monitoring Structures
Abstract Autonomous Reef Monitoring Structures (ARMS) have been applied worldwide to
characterize the critical yet frequently overlooked biodiversity patterns of marine benthic …
characterize the critical yet frequently overlooked biodiversity patterns of marine benthic …
Responses of Symbiodiniaceae Shuffling and Microbial Community Assembly in Thermally Stressed Acropora hyacinthus
W Zhu, X Liu, M Zhu, X Li, H Yin, J Huang… - Frontiers in …, 2022 - frontiersin.org
Although the importance of coral holobionts is widely accepted, the relationship between the
flexibility of the microbial structure and the coral host is very complicated. Particularly, the …
flexibility of the microbial structure and the coral host is very complicated. Particularly, the …
Contrasting effects of local environmental and biogeographic factors on the composition and structure of bacterial communities in arid monospecific mangrove soils
Mangrove forests are important biotic sinks of atmospheric CO2 and play an integral role in
nutrient-cycling and decontamination of coastal waters, thereby mitigating climatic and …
nutrient-cycling and decontamination of coastal waters, thereby mitigating climatic and …