Incongruence in the phylogenomics era
Genome-scale data and the development of novel statistical phylogenetic approaches have
greatly aided the reconstruction of a broad sketch of the tree of life and resolved many of its …
greatly aided the reconstruction of a broad sketch of the tree of life and resolved many of its …
Toward a fully resolved fungal tree of life
In this review, we discuss the current status and future challenges for fully elucidating the
fungal tree of life. In the last 15 years, advances in genomic technologies have …
fungal tree of life. In the last 15 years, advances in genomic technologies have …
[HTML][HTML] Whitefly hijacks a plant detoxification gene that neutralizes plant toxins
Plants protect themselves with a vast array of toxic secondary metabolites, yet most plants
serve as food for insects. The evolutionary processes that allow herbivorous insects to resist …
serve as food for insects. The evolutionary processes that allow herbivorous insects to resist …
[HTML][HTML] Heterotrophic nitrification–An eternal mystery in the nitrogen cycle
PJ Martikainen - Soil Biology and Biochemistry, 2022 - Elsevier
Despite the fact that heterotrophic nitrification was identified more than 100 years ago, the
biochemistry of heterotrophic nitrifiers is poorly known and their contribution to nitrification in …
biochemistry of heterotrophic nitrifiers is poorly known and their contribution to nitrification in …
Contamination detection in genomic data: more is not enough
The decreasing cost of sequencing and concomitant augmentation of publicly available
genomes have created an acute need for automated software to assess genomic …
genomes have created an acute need for automated software to assess genomic …
Biosynthetic gene clusters and the evolution of fungal chemodiversity
Covering: up to 2019 Fungi produce a remarkable diversity of secondary metabolites: small,
bioactive molecules not required for growth but which are essential to their ecological …
bioactive molecules not required for growth but which are essential to their ecological …
Domestication of industrial microbes
Domestication refers to artificial selection and breeding of wild species to obtain cultivated
variants that thrive in man-made niches and meet human or industrial requirements. Several …
variants that thrive in man-made niches and meet human or industrial requirements. Several …
Interspecific hybridization as a driver of fungal evolution and adaptation
Cross-species gene transfer is often associated with bacteria, which have evolved several
mechanisms that facilitate horizontal DNA exchange. However, the increased availability of …
mechanisms that facilitate horizontal DNA exchange. However, the increased availability of …
Emerging mechanistic insights into the regulation of specialized metabolism in plants
Plants biosynthesize a broad range of natural products through specialized and species-
specific metabolic pathways that are fuelled by core metabolism, together forming a …
specific metabolic pathways that are fuelled by core metabolism, together forming a …
Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts
Organisms exhibit extensive variation in ecological niche breadth, from very narrow
(specialists) to very broad (generalists). Two general paradigms have been proposed to …
(specialists) to very broad (generalists). Two general paradigms have been proposed to …