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[HTML][HTML] Allostery: allosteric cancer drivers and innovative allosteric drugs
Here, we discuss the principles of allosteric activating mutations, propagation downstream of
the signals that they prompt, and allosteric drugs, with examples from the Ras signaling …
the signals that they prompt, and allosteric drugs, with examples from the Ras signaling …
[HTML][HTML] Allostery, and how to define and measure signal transduction
R Nussinov, CJ Tsai, H Jang - Biophysical chemistry, 2022 - Elsevier
Here we ask: What is productive signaling? How to define it, how to measure it, and most of
all, what are the parameters that determine it? Further, what determines the strength of …
all, what are the parameters that determine it? Further, what determines the strength of …
Batch effect detection and correction in RNA-seq data using machine-learning-based automated assessment of quality
Background The constant evolving and development of next-generation sequencing
techniques lead to high throughput data composed of datasets that include a large number …
techniques lead to high throughput data composed of datasets that include a large number …
MLL-AF4 cooperates with PAF1 and FACT to drive high-density enhancer interactions in leukemia
NT Crump, AL Smith, L Godfrey… - Nature …, 2023 - nature.com
Aberrant enhancer activation is a key mechanism driving oncogene expression in many
cancers. While much is known about the regulation of larger chromosome domains in …
cancers. While much is known about the regulation of larger chromosome domains in …
Hepatitis B virus DNA integration as a novel biomarker of hepatitis B virus-mediated pathogenetic properties and a barrier to the current strategies for hepatitis B virus …
R Salpini, S D'Anna, L Benedetti, L Piermatteo… - Frontiers in …, 2022 - frontiersin.org
Chronic infection with Hepatitis B Virus (HBV) is a major cause of liver-related morbidity and
mortality worldwide. HBV-DNA integration into the human genome is recognized as a …
mortality worldwide. HBV-DNA integration into the human genome is recognized as a …
Epigenomic characterization of lymphoid neoplasms
M Duran-Ferrer, JI Martín-Subero - Annual Review of Pathology …, 2024 - annualreviews.org
Lymphoid neoplasms represent a heterogeneous group of disease entities and subtypes
with markedly different molecular and clinical features. Beyond genetic alterations, lymphoid …
with markedly different molecular and clinical features. Beyond genetic alterations, lymphoid …
Systems medicine dissection of chr1q-amp reveals a novel PBX1-FOXM1 axis for targeted therapy in multiple myeloma
N Trasanidis, A Katsarou, K Ponnusamy… - Blood, The Journal …, 2022 - ashpublications.org
Understanding the biological and clinical impact of copy number aberrations (CNAs) on the
development of precision therapies in cancer remains an unmet challenge. Genetic …
development of precision therapies in cancer remains an unmet challenge. Genetic …
Super enhancer acquisition drives expression of oncogenic PPP1R15B that regulates protein homeostasis in multiple myeloma
Multiple myeloma is a hematological malignancy arising from immunoglobulin-secreting
plasma cells. It remains poorly understood how chromatin rewiring of regulatory elements …
plasma cells. It remains poorly understood how chromatin rewiring of regulatory elements …
The SAGA acetyltransferase module is required for the maintenance of MAF and MYC oncogenic gene expression programs in multiple myeloma
YJC Chen, GB Bhaskara, Y Lu, K Lin… - Genes & …, 2024 - genesdev.cshlp.org
Despite recent advances in therapeutic treatments, multiple myeloma (MM) remains an
incurable malignancy. Epigenetic factors contribute to the initiation, progression, relapse …
incurable malignancy. Epigenetic factors contribute to the initiation, progression, relapse …
Aberrant non-canonical NF-κB signalling reprograms the epigenome landscape to drive oncogenic transcriptomes in multiple myeloma
In multiple myeloma, abnormal plasma cells establish oncogenic niches within the bone
marrow by engaging the NF-κB pathway to nurture their survival while they accumulate pro …
marrow by engaging the NF-κB pathway to nurture their survival while they accumulate pro …