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Nightmare or delight: taxonomic circumscription meets reticulate evolution in the phylogenomic era
ZT **, RGJ Hodel, DK Ma, H Wang, GN Liu… - Molecular Phylogenetics …, 2023 - Elsevier
Phylogenetic studies in the phylogenomics era have demonstrated that reticulate evolution
greatly impedes the accuracy of phylogenetic inference, and consequently can obscure …
greatly impedes the accuracy of phylogenetic inference, and consequently can obscure …
Advancing Pyrus phylogeny: Deep genome skimming‐based inference coupled with paralogy analysis yields a robust phylogenetic backbone and an updated …
ZT **, DK Ma, GN Liu, RGJ Hodel, Y Jiang, BJ Ge… - Taxon, 2024 - Wiley Online Library
The lack of a robust phylogenetic backbone has posed significant challenges to proposing
an infrageneric taxonomic classification of the pear genus, Pyrus, a widely distributed …
an infrageneric taxonomic classification of the pear genus, Pyrus, a widely distributed …
Refining the phylogeny and taxonomy of the apple tribe Maleae (Rosaceae): insights from phylogenomic analyses of 563 plastomes and a taxonomic synopsis of …
H Wang, XY Li, Y Jiang, ZT **, DK Ma, B Liu… - …, 2024 - pmc.ncbi.nlm.nih.gov
Abstract This study addresses the longstanding absence of a comprehensive phylogenetic
backbone for the apple tribe Maleae, a deficiency attributed to limited taxon and marker …
backbone for the apple tribe Maleae, a deficiency attributed to limited taxon and marker …
Unraveling the Web of Life: Incomplete lineage sorting and hybridization as primary mechanisms over polyploidization in the evolutionary dynamics of pear species
In contrast to the traditional Tree of Life (ToL) paradigm, the Web of Life (WoL) model
provides a more nuanced and precise depiction of organismal phylogeny, particularly …
provides a more nuanced and precise depiction of organismal phylogeny, particularly …
[HTML][HTML] Conserved Plastid Genomes of Pourthiaea Trees: Comparative Analyses and Phylogenetic Relationship
T Ren, C Peng, Y Lu, Y Jia, B Li - Forests, 2024 - mdpi.com
The genus Pourthiaea Decne., a deciduous woody group with high ornamental value,
belongs to the family Rosaceae. Here, we reported newly sequenced plastid genome …
belongs to the family Rosaceae. Here, we reported newly sequenced plastid genome …
[PDF][PDF] Plastome-based subgenus-level phylogenetic backbone of hawthorns: insights into the maternal position and taxonomic synopsis of Crataegus shandongensis …
XH Lin, SY **e, GN Liu, DK Ma, FR Zou… - …, 2025 - phytokeys.pensoft.net
The recent recognition of the five-subgenera classification within Crataegus has prompted
discussion about the maternal phylogenetic relationships among these subgenera, with …
discussion about the maternal phylogenetic relationships among these subgenera, with …
[HTML][HTML] Rubustingzhouensis (Rosaceae), a new species from Fujian, China
M Chen, GC Lin, T Wang, YX Zhuang, YX Yao… - …, 2024 - pmc.ncbi.nlm.nih.gov
Abstract Rubustingzhouensis C. An & GC Lin, a newly-defined species within the family
Rosaceae from Fujian Province, China, is formally described and illustrated here. R …
Rosaceae from Fujian Province, China, is formally described and illustrated here. R …
[HTML][HTML] Resurrection of Sorbustapashana (Rosaceae) based on molecular and morphological evidence
X Chen, WX Hou, JL Hu, MD Dong, BM Tan - PhytoKeys, 2024 - pmc.ncbi.nlm.nih.gov
Abstract Sorbustapashana (Rosaceae) from Taibai Shan, Qinling, China, has been treated
as a synonym of S. tianschanica. Both species belong to a distinctive group characterized by …
as a synonym of S. tianschanica. Both species belong to a distinctive group characterized by …
[CITAZIONE][C] Nightmare or delight: taxonomic circumscription meets reticulate evolution in the phylogenomic era Ze-Tao **a, b, c, Richard GJ Hodeld, Dai-Kun Mab …
BJ Geh, Q Fani, SH **f, C Xub, J Wua, BB Liub