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Unveiling the human nitroproteome: Protein tyrosine nitration in cell signaling and cancer
I Griswold-Prenner, AK Kashyap, S Mazhar… - Journal of Biological …, 2023 - jbc.org
Covalent amino acid modification significantly expands protein functional capability in
regulating biological processes. Tyrosine residues can undergo phosphorylation, sulfation …
regulating biological processes. Tyrosine residues can undergo phosphorylation, sulfation …
Oxidative modification of proteins: from damage to catalysis, signaling, and beyond
Significance: The systematic investigation of oxidative modification of proteins by reactive
oxygen species started in 1980. Later, it was shown that reactive nitrogen species could also …
oxygen species started in 1980. Later, it was shown that reactive nitrogen species could also …
PreAIP: computational prediction of anti-inflammatory peptides by integrating multiple complementary features
Numerous inflammatory diseases and autoimmune disorders by therapeutic peptides have
received substantial consideration; however, the exploration of anti-inflammatory peptides …
received substantial consideration; however, the exploration of anti-inflammatory peptides …
[HTML][HTML] iBitter-SCM: Identification and characterization of bitter peptides using a scoring card method with propensity scores of dipeptides
In general, hydrolyzed proteins, plant-derived alkaloids and toxins displays unpleasant bitter
taste. Thus, the perception of bitter taste plays a crucial role in protecting animals from …
taste. Thus, the perception of bitter taste plays a crucial role in protecting animals from …
iDPPIV-SCM: a sequence-based predictor for identifying and analyzing dipeptidyl peptidase IV (DPP-IV) inhibitory peptides using a scoring card method
P Charoenkwan, S Kanthawong… - Journal of proteome …, 2020 - ACS Publications
The inhibition of dipeptidyl peptidase IV (DPP-IV, EC 3.4. 14.5) is well recognized as a new
avenue for the treatment of Type 2 diabetes (T2D). Until now, peptide-like DDP-IV inhibitors …
avenue for the treatment of Type 2 diabetes (T2D). Until now, peptide-like DDP-IV inhibitors …
[HTML][HTML] AtbPpred: a robust sequence-based prediction of anti-tubercular peptides using extremely randomized trees
Mycobacterium tuberculosis is one of the most dangerous pathogens in humans. It acts as
an etiological agent of tuberculosis (TB), infecting almost one-third of the world's population …
an etiological agent of tuberculosis (TB), infecting almost one-third of the world's population …
cACP-2LFS: classification of anticancer peptides using sequential discriminative model of KSAAP and two-level feature selection approach
Cancer is a leading killer disease globally, it occurs when the cellular changes cause the
abnormal growth and division of the cells. Conventional treatment such as therapies and wet …
abnormal growth and division of the cells. Conventional treatment such as therapies and wet …
Identification of antioxidant proteins using a discriminative intelligent model of k-space amino acid pairs based descriptors incorporating with ensemble feature …
Antioxidant proteins have been discovered closely associated with disease control due to its
capability to eradicate excess free radicals. The accurate identification of antioxidant …
capability to eradicate excess free radicals. The accurate identification of antioxidant …
[HTML][HTML] iAMY-SCM: Improved prediction and analysis of amyloid proteins using a scoring card method with propensity scores of dipeptides
Fast, accurate identification and characterization of amyloid proteins at a large-scale is
essential for understating their role in therapeutic intervention strategies. As a matter of fact …
essential for understating their role in therapeutic intervention strategies. As a matter of fact …
Prediction of S-nitrosylation sites by integrating support vector machines and random forest
Cysteine S-nitrosylation is a type of reversible post-translational modification of proteins,
which controls diverse biological processes. It is associated with redox-based cellular …
which controls diverse biological processes. It is associated with redox-based cellular …