Cross-linking mass spectrometry for investigating protein conformations and protein–protein Interactions─ A method for all seasons

L Piersimoni, PL Kastritis, C Arlt, A Sinz - Chemical Reviews, 2021 - ACS Publications
Mass spectrometry (MS) has become one of the key technologies of structural biology. In this
review, the contributions of chemical cross-linking combined with mass spectrometry (XL …

Recent progress in mass spectrometry-based strategies for elucidating protein–protein interactions

TY Low, SE Syafruddin, MA Mohtar… - Cellular and Molecular …, 2021 - Springer
Protein–protein interactions are fundamental to various aspects of cell biology with many
protein complexes participating in numerous fundamental biological processes such as …

Towards a structurally resolved human protein interaction network

DF Burke, P Bryant, I Barrio-Hernandez… - Nature Structural & …, 2023 - nature.com
Cellular functions are governed by molecular machines that assemble through protein-
protein interactions. Their atomic details are critical to studying their molecular mechanisms …

Protein interaction landscapes revealed by advanced in vivo cross-linking–mass spectrometry

A Wheat, C Yu, X Wang, AM Burke… - Proceedings of the …, 2021 - pnas.org
Defining protein–protein interactions (PPIs) in their native environment is crucial to
understanding protein structure and function. Cross-linking–mass spectrometry (XL-MS) has …

Cullin-RING ligases employ geometrically optimized catalytic partners for substrate targeting

J Li, N Purser, J Liwocha, DC Scott, HA Byers… - Molecular cell, 2024 - cell.com
Cullin-RING ligases (CRLs) ubiquitylate specific substrates selected from other cellular
proteins. Substrate discrimination and ubiquitin transferase activity were thought to be strictly …

Reliable identification of protein-protein interactions by crosslinking mass spectrometry

S Lenz, LR Sinn, FJ O'Reilly, L Fischer… - Nature …, 2021 - nature.com
Protein-protein interactions govern most cellular pathways and processes, and multiple
technologies have emerged to systematically map them. Assessing the error of interaction …

Leveraging crosslinking mass spectrometry in structural and cell biology

A Graziadei, J Rappsilber - Structure, 2022 - cell.com
Crosslinking mass spectrometry (crosslinking-MS) is a versatile tool providing structural
insights into protein conformation and protein-protein interactions. Its medium-resolution …

Structural surfaceomics reveals an AML-specific conformation of integrin β2 as a CAR T cellular therapy target

K Mandal, G Wicaksono, C Yu, JJ Adams… - Nature Cancer, 2023 - nature.com
Safely expanding indications for cellular therapies has been challenging given a lack of
highly cancer-specific surface markers. Here we explore the hypothesis that tumor cells …

Cross-linking mass spectrometry for map** protein complex topologies in situ

K Lee, FJ O'Reilly - Essays in Biochemistry, 2023 - portlandpress.com
Cross-linking mass spectrometry has become an established technology to provide
structural information on the topology and dynamics of protein complexes. Readily …

Integration of mass spectrometry data for structural biology

HM Britt, T Cragnolini, K Thalassinos - Chemical reviews, 2021 - ACS Publications
Mass spectrometry (MS) is increasingly being used to probe the structure and dynamics of
proteins and the complexes they form with other macromolecules. There are now several …