Genenames. org: the HGNC resources in 2023

RL Seal, B Braschi, K Gray, TEM Jones… - Nucleic Acids …, 2023 - academic.oup.com
Abstract The HUGO Gene Nomenclature Committee (HGNC) assigns unique symbols and
names to human genes. The HGNC database (www. genenames. org) currently contains …

The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species

CJ Mungall, JA McMurry, S Köhler… - Nucleic acids …, 2017 - academic.oup.com
The correlation of phenotypic outcomes with genetic variation and environmental factors is a
core pursuit in biology and biomedicine. Numerous challenges impede our progress: patient …

The alliance of genome resources: building a modern data ecosystem for model organism databases

Alliance of Genome Resources Consortium - Genetics, 2019 - academic.oup.com
Abstract Model organisms are essential experimental platforms for discovering gene
functions, defining protein and genetic networks, uncovering functional consequences of …

Zebrafish models of human disease: gaining insight into human disease at ZFIN

YM Bradford, S Toro, S Ramachandran, L Ruzicka… - ILAR …, 2017 - academic.oup.com
Abstract The Zebrafish Model Organism Database (ZFIN; https://zfin. org) is the central
resource for genetic, genomic, and phenotypic data for zebrafish (Danio rerio) research …

PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity

A Rozanski, HK Moon, H Brandl… - Nucleic acids …, 2019 - academic.oup.com
Flatworms (Platyhelminthes) are a basally branching phylum that harbours a wealth of
fascinating biology, including planarians with their astonishing regenerative abilities and the …

Genotype and phenotype data standardization, utilization and integration in the big data era for agricultural sciences

CH Deng, S Naithani, S Kumari, I Cobo-Simón… - Database, 2023 - academic.oup.com
Large-scale genotype and phenotype data have been increasingly generated to identify
genetic markers, understand gene function and evolution and facilitate genomic selection …

Systematic analysis of 1298 RNA‐Seq samples and construction of a comprehensive soybean (Glycine max) expression atlas

FB Machado, KC Moharana, F Almeida‐Silva… - The Plant …, 2020 - Wiley Online Library
SUMMARY Soybean (Glycine max [L.] Merr.) is a major crop in animal feed and human
nutrition, mainly for its rich protein and oil contents. The remarkable rise in soybean …

The Zebrafish Model Organism Database: new support for human disease models, mutation details, gene expression phenotypes and searching

DG Howe, YM Bradford, A Eagle… - Nucleic acids …, 2017 - academic.oup.com
Abstract The Zebrafish Model Organism Database (ZFIN; http://zfin. org) is the central
resource for zebrafish (Danio rerio) genetic, genomic, phenotypic and developmental data …

ZFIN, The zebrafish model organism database: Updates and new directions

L Ruzicka, YM Bradford, K Frazer, DG Howe… - genesis, 2015 - Wiley Online Library
Summary The Zebrafish Model Organism Database (ZFIN; http://zfin. org) is the central
resource for genetic and genomic data from zebrafish (Danio rerio) research. ZFIN staff …

Genome-Wide Association Studies Identified Resistance Loci to Orange Rust and Yellow Leaf Virus Diseases in Sugarcane (Saccharum spp.)

X Yang, S Sood, Z Luo, J Todd, J Wang - Phytopathology, 2019 - Am Phytopath Society
Sugarcane (Saccharum spp.) supplies globally∼ 80% of table sugar and 60% of bioethanol.
Sugarcane orange rust and Sugarcane yellow leaf virus (SCYLV) are major sugarcane …