Natural language processing for EHR-based computational phenoty**

Z Zeng, Y Deng, X Li, T Naumann… - IEEE/ACM transactions …, 2018 - ieeexplore.ieee.org
This article reviews recent advances in applying natural language processing (NLP) to
Electronic Health Records (EHRs) for computational phenoty**. NLP-based …

How can natural language processing help model informed drug development?: a review

R Bhatnagar, S Sardar, M Beheshti, JT Podichetty - JAMIA open, 2022 - academic.oup.com
Objective To summarize applications of natural language processing (NLP) in model
informed drug development (MIDD) and identify potential areas of improvement. Materials …

[HTML][HTML] Supporting information retrieval from electronic health records: a report of University of Michigan's nine-year experience in develo** and using the …

DA Hanauer, Q Mei, J Law, R Khanna… - Journal of biomedical …, 2015 - Elsevier
Objective This paper describes the University of Michigan's nine-year experience in
develo** and using a full-text search engine designed to facilitate information retrieval (IR) …

[HTML][HTML] A clinician friendly data warehouse oriented toward narrative reports: Dr. Warehouse

N Garcelon, A Neuraz, R Salomon, H Faour… - Journal of biomedical …, 2018 - Elsevier
Introduction Clinical data warehouses are often oriented toward integration and exploration
of coded data. However narrative reports are of crucial importance for translational research …

[HTML][HTML] Extraction of temporal relations from clinical free text: A systematic review of current approaches

G Alfattni, N Peek, G Nenadic - Journal of biomedical informatics, 2020 - Elsevier
Background Temporal relations between clinical events play an important role in clinical
assessment and decision making. Extracting such relations from free text data is a …

Electronic health records for the diagnosis of rare diseases

N Garcelon, A Burgun, R Salomon, A Neuraz - Kidney international, 2020 - Elsevier
With the emergence of electronic health records, the reuse of clinical data offers new
perspectives for the diagnosis and management of patients with rare diseases. However …

Opportunities and challenges in leveraging electronic health record data in oncology

ML Berger, MD Curtis, G Smith, J Harnett… - Future …, 2016 - Taylor & Francis
The widespread adoption of electronic health records (EHRs) and the growing wealth of
digitized information sources about patients is ushering in an era of 'Big Data'that may …

Camembert-bio: a tasty french language model better for your health

R Touchent, L Romary, E de La Clergerie - arxiv preprint arxiv …, 2023 - arxiv.org
Clinical data in hospitals are increasingly accessible for research through clinical data
warehouses, however these documents are unstructured. It is therefore necessary to extract …

Application of information technology to clinical trial evaluation and enrollment: a review

MS Von Itzstein, M Hullings, H Mayo, MS Beg… - JAMA …, 2021 - jamanetwork.com
Importance As cancer treatment has become more individualized, oncologic clinical trials
have become more complex. Increasingly numerous and stringent eligibility criteria …

Electronic medical record search engine (EMERSE): an information retrieval tool for supporting cancer research

DA Hanauer, JS Barnholtz-Sloan, MF Beno… - JCO clinical cancer …, 2020 - ascopubs.org
PURPOSE The Electronic Medical Record Search Engine (EMERSE) is a software tool built
to aid research spanning cohort discovery, population health, and data abstraction for …